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13_1_20cm_4_scaffold_5566_2

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 986..1894

Top 3 Functional Annotations

Value Algorithm Source
short chain fatty acid transporter; K02106 short-chain fatty acids transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 236.0
  • Bit_score: 394
  • Evalue 1.70e-106
Short-chain fatty acid transporter id=3182237 bin=GWA1_Deltaproteobacteria_52_35 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA1_Deltaproteobacteria_52_35 organism_group=Deltaproteobacteria organism_desc=Good + Candidate for further analysis! similarity UNIREF
DB: UNIREF100
  • Identity: 57.8
  • Coverage: 249.0
  • Bit_score: 301
  • Evalue 8.10e-79
short chain fatty acid transporter similarity KEGG
DB: KEGG
  • Identity: 47.7
  • Coverage: 264.0
  • Bit_score: 233
  • Evalue 5.80e-59

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 909
ATGCAGCGCCCGGACCCGCGCTCCGCAAAAAACACGAACCCGCCCGCGGAGGCAGGAATGTTCGCGCGCATAGCGCTGGCGTTGACGGACTGGACCGAGCGCTGGGTGCCCGATGCTTTCGTCTTCGCGCTCCTCGCCACCCTGATCGTGATTGTCGCCGGCGTCGCGCTTACGCCGTCGCGCCTGCCGCAAGTGATCGATGCGTGGGGAAAAGGTTTCTGGGAGTTGATCCCATTCACATTGCAAATGGCGCTCATCATCATCACCGGACACGTGCTCGCCACCTCGCAGCCGGTGGGCGGAGTCATTCGCAGAGTAGCGGCATGGCCGACAACTCCGCGAAACGCCGTCGCGATGGTGGCGTTCTTTGCCATGGCGAGCTCGTGGTTCAACTGGGGCTTCAGCCTCATCTTCAGCGCCGTGCTCGCGAAAGAAATCGCGCGCCGCGTCGAGGGCGTTGACTATCGCGCGCTCGCCGCCGCCAGCTTCCTCGGGCTCGGCAGCGTCTGGGCGCAGGGTTTGAGCGGATCCGCTGCGCTACAAATGGCTACACCGGGAGCGCTGCAACCGCAGATCCGCGAGATCGTCGCCCACAACGGCATGATCCCGGGCGGAATCATTCCGTTCCGCCACACGATCTTTCTTTGGCAAAGCCTCGCGTCTGTCGTCGTCGAGATCGCGCTCGTCACTGCCGTGATGTGGCTGGTCACGCCGCCCGCCGGGCGCGGCAAAACGGCGCGCGATCTCGGCATCGTCCTCGGAAAATCCTGCTCCTCGGTTTTTTACTACACAAAACTCCTGCGCGCCTCATGCACGCCGTGCAGGGCGCGACGCCGGCAGTGTGGGGAGTCATCCTCCAGTTCCCGTTCTACGCAGGCATCGCAGGGATCATCACTTCCACCCACCTGA
PROTEIN sequence
Length: 303
MQRPDPRSAKNTNPPAEAGMFARIALALTDWTERWVPDAFVFALLATLIVIVAGVALTPSRLPQVIDAWGKGFWELIPFTLQMALIIITGHVLATSQPVGGVIRRVAAWPTTPRNAVAMVAFFAMASSWFNWGFSLIFSAVLAKEIARRVEGVDYRALAAASFLGLGSVWAQGLSGSAALQMATPGALQPQIREIVAHNGMIPGGIIPFRHTIFLWQSLASVVVEIALVTAVMWLVTPPAGRGKTARDLGIVLGKSCSSVFYYTKLLRASCTPCRARRRQCGESSSSSRSTQASQGSSLPPT*