ggKbase home page

13_1_20cm_4_scaffold_5566_3

Organism: 13_1_20CM_4_Verrucomicrobia_54_11

near complete RP 42 / 55 MC: 3 BSCG 44 / 51 MC: 1 ASCG 12 / 38 MC: 2
Location: 1972..2265

Top 3 Functional Annotations

Value Algorithm Source
short chain fatty acid transporter; K02106 short-chain fatty acids transporter Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated UNIPROT
DB: UniProtKB
  • Identity: 93.8
  • Coverage: 97.0
  • Bit_score: 185
  • Evalue 2.90e-44
Short-chain fatty acid transporter id=3845935 bin=GWB1_Deltaproteobacteria_rel_55_8 species=unknown genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWB1_Deltaproteobacteria_rel_55_8 organism_group=Deltaproteobacteria organism_desc=Good similarity UNIREF
DB: UNIREF100
  • Identity: 76.5
  • Coverage: 98.0
  • Bit_score: 164
  • Evalue 5.00e-38
short chain fatty acid transporter similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 96.0
  • Bit_score: 141
  • Evalue 1.70e-31

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 294
GTGCTCGGCGTGTTCGTTCCGTCCGGCGGATCGAAATGGGTCGTCGAAGCGCCCTACGTCATGGCCGCCGCGCACGAGCTCAAAGTGCACTTGGGCTGGGTCGTGGCAGCCTACGATTTGGGCGAAGCGCTCGCGAATCTCGTGCAGCCCTTCTGGATGCTGCCGATCCTGGGACTGTTTCACCTCCGCGCGCGCGACGTCATGGGCTACACCTTGGTCGTTTTTCTCGTGCTCGTCCCCGTGGTACTGCTGCTCGTGACCGTCCTCGGGGCGACGCTGTCTTATCCGTTGTAA
PROTEIN sequence
Length: 98
VLGVFVPSGGSKWVVEAPYVMAAAHELKVHLGWVVAAYDLGEALANLVQPFWMLPILGLFHLRARDVMGYTLVVFLVLVPVVLLLVTVLGATLSYPL*