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13_1_20cm_4_scaffold_18862

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_20cm_4_scaffold_18862_1
GWC2_SYX_53_9_curated, Bacteria

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1..969
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Terracoccus sp. 273MFTsu3.1 RepID=UPI00036C0150
type ii secretion system integral membrane subunit; K12510 tight adherence protein B Tax=GWC2_SYX_53_9_curated
type II secretion system protein F
13_1_20cm_4_scaffold_18862_2
Thermosinus carboxydivorans, Thermosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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974..2065
DNA (1092bp) protein (364aa)
Type II secretion system protein n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPR9_9FIRM
Type II secretion system protein {ECO:0000313|EMBL:EAX48038.1}; Flags: Precursor;; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="T
type II secretion system F domain protein
13_1_20cm_4_scaffold_18862_3
Entamoeba histolytica, Entamoeba, Eukaryota

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2187..3827
DNA (1641bp) protein (547aa)
Rab family GTPase n=2 Tax=Entamoeba histolytica RepID=B1N3J0_ENTHI
Rab family GTPase {ECO:0000313|EMBL:EDS89466.1}; TaxID=5759 species="Eukaryota; Amoebozoa; Archamoebae; Entamoebidae; Entamoeba.;" source="Entamoeba histolytica.;"
hypothetical protein
13_1_20cm_4_scaffold_18862_4
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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3873..4436
DNA (564bp) protein (188aa)
sigma-70 family RNA polymerase sigma factor Tax=RBG_16_Actinobacteria_68_12_curated
RNA polymerase sigma-H factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily id=14631759 bin=bin9_gal15 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin9_gal15 organism_group=GAL15
ECF subfamily RNA polymerase sigma-24 subunit
13_1_20cm_4_scaffold_18862_5
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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4433..4687
DNA (255bp) protein (85aa)
Tax=RBG_16_Actinobacteria_68_12_curated
13_1_20cm_4_scaffold_18862_6
unknown

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4703..5047
DNA (345bp) protein (115aa)

This feature has no annotations

13_1_20cm_4_scaffold_18862_7
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

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5275..6096
DNA (822bp) protein (274aa)
Peptidase families S8 and S53 subfamily (Fragment) n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9W6L8_9ACTO
serine protease Tax=RBG_16_Actinobacteria_68_12_curated
peptidase S8 and S53 subtilisin kexin sedolisin
13_1_20cm_4_scaffold_18862_8
Streptomyces himastatinicus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

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6093..6722
DNA (630bp) protein (210aa)
Putative sigma factor SigB regulation protein rsbU n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9W6L7_9ACTO
Putative sigma factor SigB regulation protein rsbU {ECO:0000313|EMBL:EFL22548.1}; TaxID=457427 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomy
putative GAF sensor protein
13_1_20cm_4_scaffold_18862_9
RBG_16_Actinobacteria_68_12_curated, Actinobacteria, Bacteria

Not on your lists

6719..7915
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Glaciibacter superstes RepID=UPI0003B36A56
Major facilitator superfamily MFS_1 Tax=RBG_16_Actinobacteria_68_12_curated
Major facilitator superfamily MFS_1
13_1_20cm_4_scaffold_18862_10
unknown

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comp(7970..8131)
DNA (162bp) protein (54aa)

This feature has no annotations

Displaying 10 items

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