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13_1_40cm_scaffold_6111

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_6111_1
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(1239..1943)
DNA (705bp) protein (235aa)
id=14627111 Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
id=14627111 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
13_1_40cm_scaffold_6111_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(1940..2452)
DNA (513bp) protein (171aa)
ECF subfamily RNA polymerase sigma-24; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
RNA polymerase sigma factor id=4801469 bin=GWC2_Methylomirabilis_70_16 species=Thermobispora bispora genus=Thermobispora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
ECF subfamily RNA polymerase sigma-24
13_1_40cm_scaffold_6111_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(2457..3005)
DNA (549bp) protein (183aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3); K00950 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase [EC:2.7.6.3] Tax=GWA2_Rokubacteria_73_35_cura
7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase id=2164593 bin=GWA2_Methylomirabilis_73_35 species=uncultured candidate division OP1 bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
13_1_40cm_scaffold_6111_4
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(3005..3337)
DNA (333bp) protein (111aa)
folQ; dihydroneopterin aldolase (EC:4.1.2.25); K01633 dihydroneopterin aldolase [EC:4.1.2.25] Tax=GWA2_Rokubacteria_73_35_curated
folQ; Dihydroneopterin aldolase (EC:4.1.2.25)
Dihydroneopterin aldolase id=2164663 bin=GWA2_Methylomirabilis_73_35 species=Streptococcus ictaluri genus=Streptococcus taxon_order=Lactobacillales taxon_class=Bacilli phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_6111_5
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(3361..4077)
DNA (717bp) protein (239aa)
dapB; dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
dihydrodipicolinate reductase (EC:1.3.1.26)
Dihydrodipicolinate reductase id=2164669 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
13_1_40cm_scaffold_6111_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(4100..4987)
DNA (888bp) protein (296aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
Dihydrodipicolinate synthase id=4801457 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_scaffold_6111_7
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria

Not on your lists

comp(4984..6234)
DNA (1251bp) protein (417aa)
lysA; diaminopimelate decarboxylase (EC:4.1.1.20) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
lysA; diaminopimelate decarboxylase (EC:4.1.1.20); K01586 diaminopimelate decarboxylase [EC:4.1.1.20] id=14627103 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
lysA; diaminopimelate decarboxylase (EC:4.1.1.20)
13_1_40cm_scaffold_6111_8
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

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6320..7090
DNA (771bp) protein (257aa)
Inositol oxygenase {ECO:0000313|EMBL:EEF59827.1}; EC=1.13.99.1 {ECO:0000313|EMBL:EEF59827.1};; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales; Verrucomicrobia su
Inositol oxygenase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XK04_9BACT
protein of unknown function DUF706
13_1_40cm_scaffold_6111_9
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria

Not on your lists

comp(7107..8177)
DNA (1071bp) protein (357aa)
Putative Fibronectin, type III id=2164681 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Fibronectin, type III Tax=GWA2_Rokubacteria_73_35_curated
fibronectin type III domain-containing protein
13_1_40cm_scaffold_6111_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria

Not on your lists

comp(8174..9118)
DNA (945bp) protein (315aa)
argininosuccinate lyase; K01755 argininosuccinate lyase [EC:4.3.2.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
argH; argininosuccinate lyase (EC:4.3.2.1) id=14627101 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
argininosuccinate lyase
Displaying 10 items

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