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13_1_40cm_scaffold_171_29

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(36591..38867)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor id=3879943 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 78.1
  • Coverage: 384.0
  • Bit_score: 581
  • Evalue 1.00e-162
RNA polymerase sigma 54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=GWA2_Rokubacteria_73_35_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.1
  • Coverage: 384.0
  • Bit_score: 581
  • Evalue 1.40e-162
RNA polymerase sigma54 factor similarity KEGG
DB: KEGG
  • Identity: 47.2
  • Coverage: 394.0
  • Bit_score: 344
  • Evalue 1.00e-91

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Taxonomy

GWA2_Rokubacteria_73_35_curated → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 2277
ATGACCCCGCTGCTGCAGCAGGCGATCCAGCTGCTGCAGCTGTCCACGCTCGAGCTCCAGGAAGTGGTCCAGAAGGAGCTGCTCGAGAACCCGCTGCTGGAAGAGGTGCCGACCGAGACGCCGGAGACGCCCGAGGCACCCGCGCCCGGCGAGACCCCGGCGCCGACGGCGCCCACCACCGCGGAAACGCAGCCGCTGGAGCCTCCCCCGGTGGACCGCGAGCGGGGCACCGACGACCTGCCGTTCGATCTCACCGCGGTCATGTTCGACGACCACGAAGAGCGCTCGCTGGTGGCCCAGGAGGACCGCGACGAGCTGCCCTTCGAGAACATGGTGCGGTCGCAGTCCTCGCTCACCGACCACCTCGACGAGCAACTTCGCTTCGCTGTCGAGGACCCGGCGGTCCGCCGCATCGGTAACGAGATCATCGGCAACCTGGACGAGGACGGCTATCTGCGGGCCGAGGTGAGCGAGATCGCCGCGCGCTGCCAGACCACCGTGGAGGACGTCGAGAAGGTCCTGGCCCTCGTGCAGGCCTTCGATCCGCCCGGCGTGGCCGCCCGCTCCATCCAGGAGTGCCTGCTCATCCAGCTCAAGAGCGATCCCAACCCCGACCCCGTCTCGGTGGAGATCGTCGAGCAGTACTTCGACGACCTGACCAAGCGCCGCTATCCGGACATCGCCCGCGCGCTCAAGCTCTCCCTCGATCGCGTCATGGAGTCGGTCGAGGAGATCATGAGCCTCGAGCCCAAGCCGGGCCGCCGCTTCGGCGGCAGCGACTCGCGCTACATCGTGCCCGACGTCGTCGTACACAAAATGGGCAACGAGTACGTGGTCGTGCTGAACGAGGACGGCATTCCGCGGCTCCGCGTGAATTCGCTCTACCGCTCGCTCTTGCGCAACTCGGGCGACGAGGCTCGCGCGTACGTCGAGCAGAAGCTTCGCTCGGCCGTCTGGCTGATCAAGAGCGTGGACCAGCGCCAGCGCACCCTGCGCAAGGTGACCCAATCGATCGTGAAGTTCCAGCGCGAGTTCCTCGACAAGGGCCTGCCGTACCTGCGGCCGCTCTCCCTTCGCGACGTGGGCGAAGACATCGGCATGCACGAATCGACCATCAGCCGCGTGACGACCAACAAGTACGTGGAAGCTGAAGTACTTCTTCCACAGCGGCATCGCCTCGGGCACCGGCGAGATGGTGTCGTCCGTCTCGGTGAAGAAGATGATCCAGGACCTCCTGGCCAACGAAGACCCGTCCAAGCCGCTGAGCGACCAGGAGGTCGCGCAGATCCTCAAGGGCCGCGGCCTCGTCATCGCCCGGCGGACGGTCGCCAAGTACCGCGAGGAGCTCGGCATCCTGCCGTCTCATCAGCGGCGGCTCGCTCCCAAGCGCCGCTGACCCAGGGCCCGATGGCCGACAGCATCGCCTTCGTCGTCATCACCGGCATGAGCGGGGCGGGCAAGAGCTTCGCCATCAAGTGCCTCGAGGACATCGGCTTCTTCTGCGTCGACAACCTGCCCACGACGCTCATTCCGACGTTTGCCGACCTCATCGCGCGTGCCGGCCAGAAGTTCAGCCGCGTCGCGCTCGGTGTCGACGTGCGGGAGGGCGAATACCTGCCGCACCTGCTCGACGCGATCGGCGAGCTCCGCGCGCGCGGGCACAAGGTGGAGATCCTGTTCCTGGAGGCCAGTGACGAGGCGCTGGTGCGGCGCTATCACGAGACGCGGCGGCGCCATCCCCTGGGTGGCGAAGGCCACGTTCACGACGCGATCCGGGCCGAGCGCAAGGCGCTCGCCCACATGCGGGAGGTCGCCGACCGCATCGTGGATACCTCGTCGCTCACCGTACACCAGTTCAAGGAGCTGCTCGGCGACCTTCACGGCACGCCCCGCACGAGGCCGGGCCTGGCCGCCTCGCTGGTATCGTTCGGCTTCCGGCACGGCATTCCCATCGACGCCGATCTCGTCTTCGACGTGCGGTTCCTGCCGAATCCGCACTTCGTGGAGGGGCTCCGGCCGCTCGACGGCCGTGACCCGCGCGTTCGTGAGTTCATCCTCTCGCACGACCTCAGCCGCGACCTGCTCAAGCGGCTGCAGGATCTTCTCCGCTTCCTGCTCCCGGCGTACCAGCGGGAAGGCAAGGCGTACCTGACCGTGGCCATCGGGTGCACGGGCGGCCGCCATCGGTCGGTGGCCTTCGTCGAGGAGCTGCGCGGCTTCATGGAGTCTCAGGGATTCACGCCCACCGTGGTCCACCGCGACCTCGACCGCGAGTAG
PROTEIN sequence
Length: 759
MTPLLQQAIQLLQLSTLELQEVVQKELLENPLLEEVPTETPETPEAPAPGETPAPTAPTTAETQPLEPPPVDRERGTDDLPFDLTAVMFDDHEERSLVAQEDRDELPFENMVRSQSSLTDHLDEQLRFAVEDPAVRRIGNEIIGNLDEDGYLRAEVSEIAARCQTTVEDVEKVLALVQAFDPPGVAARSIQECLLIQLKSDPNPDPVSVEIVEQYFDDLTKRRYPDIARALKLSLDRVMESVEEIMSLEPKPGRRFGGSDSRYIVPDVVVHKMGNEYVVVLNEDGIPRLRVNSLYRSLLRNSGDEARAYVEQKLRSAVWLIKSVDQRQRTLRKVTQSIVKFQREFLDKGLPYLRPLSLRDVGEDIGMHESTISRVTTNKYVEAEVLLPQRHRLGHRRDGVVRLGEEDDPGPPGQRRPVQAAERPGGRADPQGPRPRHRPADGRQVPRGARHPAVSSAAARSQAPLTQGPMADSIAFVVITGMSGAGKSFAIKCLEDIGFFCVDNLPTTLIPTFADLIARAGQKFSRVALGVDVREGEYLPHLLDAIGELRARGHKVEILFLEASDEALVRRYHETRRRHPLGGEGHVHDAIRAERKALAHMREVADRIVDTSSLTVHQFKELLGDLHGTPRTRPGLAASLVSFGFRHGIPIDADLVFDVRFLPNPHFVEGLRPLDGRDPRVREFILSHDLSRDLLKRLQDLLRFLLPAYQREGKAYLTVAIGCTGGRHRSVAFVEELRGFMESQGFTPTVVHRDLDRE*