name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
13_1_40cm_scaffold_171_1
Sphaerobacter thermophilus, Sphaerobacter, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria
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Not on your lists |
comp(1..1056)
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Beta-lactamase domain protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C608_SPHTD
beta-lactamase domain-containing protein
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=479434 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Sphaerobacter.;" source="S
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13_1_40cm_scaffold_171_2
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
1138..1446
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dioxygenase, ferredoxin subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Rieske (2Fe-2S) iron-sulfur domain-containing protein id=4819262 bin=GWC2_Methylomirabilis_70_16 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
dioxygenase, ferredoxin subunit
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13_1_40cm_scaffold_171_3
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
1475..1726
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hypothetical protein id=4745861 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
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13_1_40cm_scaffold_171_4
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
2390..3028
|
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
hypothetical protein id=4745859 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_scaffold_171_5
Desulfovibrio africanus, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria
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Not on your lists |
3080..4039
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1-deoxy-D-xylulose-5-phosphate synthase (EC:2.2.1.7)
Transketolase n=1 Tax=Desulfovibrio africanus PCS RepID=M5Q004_DESAF
Transketolase {ECO:0000313|EMBL:EMG36291.1}; Flags: Precursor;; TaxID=1262666 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="
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13_1_40cm_scaffold_171_6
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(4098..4919)
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putative phenylacetic acid degradation protein; K02609 ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA [EC:1.14.13.149] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative phenylacetic acid degradation protein id=4527241 bin=GWF2_Methylomirabilis_70_14 species=Bacteriovorax marinus genus=Bacteriovorax taxon_order=Bdellovibrionales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
putative phenylacetic acid degradation protein
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13_1_40cm_scaffold_171_7
CSP1_6_Rokubacteria, Rokubacteria, Bacteria
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Not on your lists |
comp(4933..6228)
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phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] id=14628064 bin=bin7_NC10_sister species=Thermaerobacter subterraneus genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
phenylacetate--CoA ligase (EC:6.2.1.30); K01912 phenylacetate-CoA ligase [EC:6.2.1.30] Tax=CSP1_6_Rokubacteria
phenylacetate--CoA ligase (EC:6.2.1.30)
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13_1_40cm_scaffold_171_8
unknown
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Not on your lists |
comp(6326..6547)
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This feature has no annotations |
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13_1_40cm_scaffold_171_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria
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Not on your lists |
comp(6544..6810)
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id=14628038 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14628038 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
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13_1_40cm_scaffold_171_10
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(6807..7967)
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group 1 glycosyl transferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Glycosyl transferase group 1 id=4745855 bin=GWA2_Methylomirabilis_73_35 species=Thermaerobacter marianensis genus=Thermaerobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
group 1 glycosyl transferase
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13_1_40cm_scaffold_171_11
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(7984..8493)
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(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB id=4745854 bin=GWA2_Methylomirabilis_73_35 species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=GWA2_Rokubacteria_73_35_curated
hypothetical protein
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13_1_40cm_scaffold_171_12
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(8478..9818)
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tRNA-i(6)A37 thiotransferase enzyme MiaB; K06168 bifunctional enzyme involved in thiolation and methylation of tRNA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB id=4891635 bin=GWC2_Methylomirabilis_70_16 species=Methyloversatilis universalis genus=Methyloversatilis taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
tRNA-i(6)A37 thiotransferase enzyme MiaB
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13_1_40cm_scaffold_171_13
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(10003..11505)
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hypothetical protein; K01622 fructose 1,6-bisphosphate aldolase/phosphatase [EC:4.1.2.13 3.1.3.11] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
fbp; bifunctional fructose-1,6-bisphosphatase (EC:3.1.3.11) id=14628042 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Parcubacteria tax=bin7_NC10_sister organism_group=NC10
fbp; bifunctional fructose-1,6-bisphosphatase (EC:3.1.3.11)
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13_1_40cm_scaffold_171_14
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
11644..12537
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Putative sugar-binding domain protein n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MJ37_9FIRM
DeoR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
transcriptional regulatory protein
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13_1_40cm_scaffold_171_15
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(12657..13619)
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acetyl-CoA carboxylase, carboxyl transferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curate
acetyl-CoA carboxylase carboxyltransferase subunit alpha (EC:6.4.1.2); K01962 acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2] id=14627942 bin=bin7_NC10_sister species=Calditerrivibrio nitroreducens genus=Calditerrivibrio taxon_order=Deferribacterales taxon_class=Deferribacteres phylum=Deferribacteres tax=bin7_NC10_sister organism_group=NC10
acetyl-CoA carboxylase subunit alpha
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13_1_40cm_scaffold_171_16
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(13612..18345)
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dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7) Tax=GWA2_Rokubacteria_73_35_curated
dnaE; DNA polymerase III subunit alpha (EC:2.7.7.7)
DNA polymerase III, alpha subunit id=4527229 bin=GWF2_Methylomirabilis_70_14 species=Thiocapsa marina genus=Thiocapsa taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_scaffold_171_17
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(18364..19917)
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GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
GMP synthase (EC:6.3.5.2); K01951 GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2] id=14625745 bin=bin7_NC10_sister species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
GMP synthase (EC:6.3.5.2)
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13_1_40cm_scaffold_171_18
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
comp(19931..21091)
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guaB; IMP dehydrogenase/GMP reductase; K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
IMP dehydrogenase family protein id=4208294 bin=GWA2_Methylomirabilis_73_35 species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
guaB; IMP dehydrogenase/GMP reductase
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13_1_40cm_scaffold_171_19
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
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Not on your lists |
comp(21209..21925)
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birA; bira bifunctional protein (EC:6.3.4.15); K03524 BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase [EC:6.3.4.15] Tax=GWA2_Rokubacteria_73_35_
biotin--acetyl-CoA-carboxylase ligase (EC:6.3.4.15)
Biotin operon repressor and biotin--acetyl-CoA carboxylase ligase id=4208292 bin=GWA2_Methylomirabilis_73_35 species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_scaffold_171_20
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(21955..24603)
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valS; valyl-tRNA synthetase (EC:6.1.1.9); K01873 valyl-tRNA synthetase [EC:6.1.1.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Valine--tRNA ligase id=4810688 bin=GWC2_Methylomirabilis_70_16 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
valS; valyl-tRNA ligase
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13_1_40cm_scaffold_171_21
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(24611..25630)
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Valine--tRNA ligase id=4208290 bin=GWA2_Methylomirabilis_73_35 species=Desulfobacca acetoxidans genus=Desulfobacca taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
Valine--tRNA ligase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
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13_1_40cm_scaffold_171_22
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
25677..27596
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YjgP/YjgQ family permease Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative permease id=3462289 bin=GWA2_Methylomirabilis_73_35 species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
YjgP/YjgQ family permease
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13_1_40cm_scaffold_171_23
RLO_Rokubacteria_71_22, Rokubacteria, Bacteria
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Not on your lists |
27571..27966
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YjgP/YjgQ family permease Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated
Putative permease id=3462289 bin=GWA2_Methylomirabilis_73_35 species=Terriglobus roseus genus=Terriglobus taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein
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13_1_40cm_scaffold_171_24
R_NC10_66_22, NC10, Bacteria
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Not on your lists |
comp(28226..30862)
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UPF0182 protein DAMO_1249 id=4527175 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_NC10_66_22_curated
hypothetical protein
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13_1_40cm_scaffold_171_25
R_Rokubacteria_71_18, Rokubacteria, Bacteria
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Not on your lists |
comp(30874..32133)
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adenosylhomocysteinase (EC:3.3.1.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated
adenosylhomocysteinase (EC:3.3.1.1)
Adenosylhomocysteinase id=4810684 bin=GWC2_Methylomirabilis_70_16 species=Anaerolinea thermophila genus=Anaerolinea taxon_order=Anaerolineales taxon_class=Anaerolineae phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
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13_1_40cm_scaffold_171_26
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(32238..33389)
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metK; S-adenosylmethionine synthetase (EC:2.5.1.6); K00789 S-adenosylmethionine synthetase [EC:2.5.1.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
metK; methionine adenosyltransferase (EC:2.5.1.6) id=14625753 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
metK; methionine adenosyltransferase (EC:2.5.1.6)
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13_1_40cm_scaffold_171_27
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(33431..34477)
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bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8); K15916 glucose/mannose-6-phosphate isomerase [EC:5.3.1.9 5.3.1.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
bifunctional phosphoglucose/phosphomannose isomerase (EC:5.3.1.8)
Bifunctional phosphoglucose/phosphomannose isomerase id=3879951 bin=GWA2_Methylomirabilis_73_35 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
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13_1_40cm_scaffold_171_28
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(34477..36567)
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4-alpha-glucanotransferase Tax=GWA2_Rokubacteria_73_35_curated
4-alpha-glucanotransferase id=3879949 bin=GWA2_Methylomirabilis_73_35 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
4-alpha-glucanotransferase
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13_1_40cm_scaffold_171_29
GWA2_Rokubacteria_73_35_curated, Rokubacteria, Bacteria
|
Not on your lists |
comp(36591..38867)
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RNA polymerase sigma-54 factor id=3879943 bin=GWA2_Methylomirabilis_73_35 species=Desulfarculus baarsii genus=Desulfarculus taxon_order=Desulfarculales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
RNA polymerase sigma 54 subunit RpoN; K03092 RNA polymerase sigma-54 factor Tax=GWA2_Rokubacteria_73_35_curated
RNA polymerase sigma54 factor
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13_1_40cm_scaffold_171_30
R_Rokubacteria_73_56, Rokubacteria, Bacteria
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Not on your lists |
comp(38936..39658)
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lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily id=3879942 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily
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