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13_1_40cm_scaffold_171_30

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(38936..39658)

Top 3 Functional Annotations

Value Algorithm Source
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 88.8
  • Coverage: 240.0
  • Bit_score: 420
  • Evalue 1.30e-114
Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily id=3879942 bin=GWA2_Methylomirabilis_73_35 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 88.0
  • Coverage: 241.0
  • Bit_score: 418
  • Evalue 4.70e-114
lptB; lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily similarity KEGG
DB: KEGG
  • Identity: 65.6
  • Coverage: 241.0
  • Bit_score: 317
  • Evalue 4.20e-84

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 723
ATGGAAGGCCTGGTCGCGCTCGATCTGATGAAGTGGTTCAAGCACCGCAAGGTCGTGGACAAGGTCTCCCTCGACATCCAGCGCGGCGAGGTGGTCGGGCTGCTCGGGCCGAACGGCGCCGGCAAGACGACGTCTTTCTACATGATGGTCGGGCTGTTGCCGAGCGACGGAGGCCGGATCTTCCTGGAAGGCCAGGAGATCACCGCGTTACCGATGTACCAGCGGTGCCGATTGGGCGTAGGCTATCTTCCACAGGAGTCGTCGGTGTTCCGGAAGCTCACGGTGGAGGAAAACCTGCTGGCCATTCTCGAGACACTCGATCTGTCGGCATCGGAGCGCCGCGAGCGCGCGGCCGAGCTGTTGGCCGAGCTCGGCCTGACGCCTCTGGCGCCGTATCCGGCCTACACACTGTCGGGCGGCGAGCGGCGCCGGCTCGAGATCACGCGCGCGCTGGTCACGTCGCCCCAGTACCTCCTGCTCGACGAGCCATTCACGGGGATCGATCCGATTGCGATCGGCGACATCCAGGAAATCGTCGGTCGCTTGCGCGAGAAGGGCATCGGGATCCTCATCACCGACCACAACGTCCGCGAGACGCTGCGGATCACGGACCGGGCCTACATCATGTACGACGGTAAGATCCTGGTTGCAGGCACTGCCAGTGAGATCGCAGCGAATCCTATAGCCCGGGAGATCTACCTGGGAGAGAAGTTCTCTCTCTAG
PROTEIN sequence
Length: 241
MEGLVALDLMKWFKHRKVVDKVSLDIQRGEVVGLLGPNGAGKTTSFYMMVGLLPSDGGRIFLEGQEITALPMYQRCRLGVGYLPQESSVFRKLTVEENLLAILETLDLSASERRERAAELLAELGLTPLAPYPAYTLSGGERRRLEITRALVTSPQYLLLDEPFTGIDPIAIGDIQEIVGRLREKGIGILITDHNVRETLRITDRAYIMYDGKILVAGTASEIAANPIAREIYLGEKFSL*