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13_1_40cm_scaffold_171_31

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(39662..40279)

Top 3 Functional Annotations

Value Algorithm Source
lipopolysaccharide transport periplasmic protein LptA; K09774 lipopolysaccharide export system protein LptA Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_71_18_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 69.5
  • Coverage: 190.0
  • Bit_score: 252
  • Evalue 7.00e-64
Lipopolysaccharide transport periplasmic protein LptA id=4810649 bin=GWC2_Methylomirabilis_70_16 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10 similarity UNIREF
DB: UNIREF100
  • Identity: 62.8
  • Coverage: 183.0
  • Bit_score: 226
  • Evalue 2.20e-56
OstA-like protein similarity KEGG
DB: KEGG
  • Identity: 37.9
  • Coverage: 203.0
  • Bit_score: 114
  • Evalue 4.60e-23

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Taxonomy

R_Rokubacteria_71_18 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 618
GTGAGGGCTCGCCTGGTTCCGGCGGCCGTGATGCTCGTTCCACTACTCGCAGCCGGGTTCGCCGCCGCCCAGGCGCCCACGGCACCCGCCGCTCCCGGTGGCAAGCCCGAGACCCGGAAATCCGAGGACCGCGGCCAGCCGCTGACGATCGATGCCGACCGGATGGAGCGCTACGGCAAGGAAAGCCTGGTGATCTTCACCGGCAACGTCGTCGCCCGCCAGAACGGTTCGGTGCAATACGCCGACCGCATGGAGGTCTATCTCGACGAGAAGGGTGACAAGGTCCTGCGCACCGTGTCCACCGGCGCCGTGCGGATCACAACCAAGGACTGCAAGATGGGGACGGCCCGCCGCGTCGAATATTTTGACCTCGAGCAGCGGATGGTGCTGATCGGCAATGCGCGTGTCTGGCAAGAAGATAACGTGGTTACCGGCGAGACCATCACGATCTTCCTGAGCCAGGATCGCAGCGTCGTCCAGGGGGGCAAGCAGGAGCGCGTGAAGGCCGTCTTCTACCAGAAGCCTGAGAGCTCGAGCGGCGGCACCACGACGTCGCCAGCGGCGGCCGTGTATCCGGCTGACAAAGCTCCGGCCAAGACCGGGACGCCCTGCAGCTAA
PROTEIN sequence
Length: 206
VRARLVPAAVMLVPLLAAGFAAAQAPTAPAAPGGKPETRKSEDRGQPLTIDADRMERYGKESLVIFTGNVVARQNGSVQYADRMEVYLDEKGDKVLRTVSTGAVRITTKDCKMGTARRVEYFDLEQRMVLIGNARVWQEDNVVTGETITIFLSQDRSVVQGGKQERVKAVFYQKPESSSGGTTTSPAAAVYPADKAPAKTGTPCS*