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13_1_40cm_scaffold_3917_24

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(20822..21748)

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_73_56_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 78.9
  • Coverage: 308.0
  • Bit_score: 482
  • Evalue 3.70e-133
Transcription-repair coupling factor id=4980429 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 78.2
  • Coverage: 307.0
  • Bit_score: 477
  • Evalue 1.40e-131
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 53.4
  • Coverage: 298.0
  • Bit_score: 301
  • Evalue 2.30e-79

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Taxonomy

R_Rokubacteria_73_56 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 927
GTGCCCGACGCGCGTATCGTCATGGCGCACGGCCAGATGCGCGAGCGTGAGCTGGAAGCGACGATGGTGAAGTTCGTGAGCGGCCAGGCCGACGTGCTGGTATCGACGGCGATCATCGAATCCGGGCTCGACATCCCGGCCTCCAACACGATCATCGTCAACCGGGCCGACCGGTTCGGACTCGCCCAGCTCTACCAGCTGCGGGGCCGGGTCGGGCGCGAGCGCCAGCAGGCGTACTGCTACCTGCTCGTCCCCGCCGACGGGCGGGTCGACGAGCAAGCCCAGCGCCGGTTGCGCGTCCTGCAGGAGCTGACGGAGCTCGGCTCCGGTTTCAAGCTGGCCCTCCGTGACCTCGAGATCCGTGGGGCCGGGAACCTCCTGGGGGCGCAACAGCATGGTCACATCGCGGCCGTGGGCTTCGATCTTTATTCGAAGCTCCTGGCCGAGGCCGTGGCAGAATTGAAGGGCGAACCGGCGGCTGCGACCATCGAGCCGGTGATCAGCGTCAACACTGAAGGATTCTTGCCGGAAGACTATGTCCCCGAGGTCAATCAGCGACTGGCCTTCTACAAGCGTCTGGCCGGTGCCAGCGGCGACGACGCCGTCGCCGATCTCCGCGCCGAGCTGGCCGACCGCTTCGGGCCTCCGCCGCACGAGGTCGAGCAGCTCCTCGACATCGTGCGCATCCGGGGGGCCGCGCGGAACCTCGGGATCGAGCGTATCGAGGCCGGGGCCGGCCGCGCGCTCCTCACGTTCGCCCCGTCCACCAAGGTGGAGCCGGCCACGCTCGTCGGGCTCGTGCAGAAGAGCCGCGGGCGTCTGGCCATGAAGCGTGAGTTCACCCTCGACGCCGTGATCGCTCGCGGAGAGTGGCCGGCGGTGCGGGACGCAGTCCTCGCGCTGCTGGCCGAGATCGCTCGCGGATGA
PROTEIN sequence
Length: 309
VPDARIVMAHGQMRERELEATMVKFVSGQADVLVSTAIIESGLDIPASNTIIVNRADRFGLAQLYQLRGRVGRERQQAYCYLLVPADGRVDEQAQRRLRVLQELTELGSGFKLALRDLEIRGAGNLLGAQQHGHIAAVGFDLYSKLLAEAVAELKGEPAAATIEPVISVNTEGFLPEDYVPEVNQRLAFYKRLAGASGDDAVADLRAELADRFGPPPHEVEQLLDIVRIRGAARNLGIERIEAGAGRALLTFAPSTKVEPATLVGLVQKSRGRLAMKREFTLDAVIARGEWPAVRDAVLALLAEIARG*