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13_1_40cm_scaffold_3917_25

Organism: 13_1_40CM_Rokubacteria_68_15

partial RP 19 / 55 BSCG 18 / 51 ASCG 9 / 38 MC: 1
Location: comp(21699..23933)

Top 3 Functional Annotations

Value Algorithm Source
mfd; transcription-repair-coupling factor (TRCF) (ATP-dependent helicase mfd) (EC:3.6.1.-) Tax=RIFCSPLOWO2_12_FULL_Rokubacteria_71_22_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 73.2
  • Coverage: 735.0
  • Bit_score: 1068
  • Evalue 0.0
mfd; transcription-repair coupling factor (EC:3.6.1.-) similarity KEGG
DB: KEGG
  • Identity: 39.6
  • Coverage: 767.0
  • Bit_score: 515
  • Evalue 3.20e-143
Transcription-repair coupling factor id=4980429 bin=GWA2_Methylomirabilis_73_35 species=Thermosinus carboxydivorans genus=Thermosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis similarity UNIREF
DB: UNIREF100
  • Identity: 73.6
  • Coverage: 735.0
  • Bit_score: 1063
  • Evalue 0.0

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Taxonomy

RLO_Rokubacteria_71_22 → Rokubacteria → Bacteria

Sequences

DNA sequence
Length: 2235
ATGTTGAGTGAGTGGGCCGCCTTCAGCGAGCTGGCGAAAGCCTTCGCCGAGGGACAGGCCTGCCTGCGCGTCGCCGGACTCAACGGGTCCGCCCGAGCGCTGGCCATCGCCGGCCTCGTCCAGACCCAGCCCCGGCCACTCCTCGTCGTCGCCGCCACTCTCCCCGACGCTCACCGCTGGGCCCAGGACCTCAGGTTCTTCGGAGCGCCCGCCGTGGAGTTTCCCGAGCGCGAGCCTCGCTTGTGGCGAGGCGGACGGCAACGCGAGAGTGACGCCGAGCGGGCGGTCGTCTGTCGTCGGTTGCTCGCCGGCGAGTCGCTCGTCGTCGTCACCACGCCGGCGGCCCTCGACGTCACGCTGCCTACGCCGGCGGCGTTTCGCGCGGCGACGCTGCGCTTCACGACCGGCGACAGCCTCGATCGCGAGCTCCTGGTCGAAGCGCTGGACAAGGCCGGCTACGAGCGGACGGAGACCGTCGTCGAGGTCGGCCAGTGGAGCGTGCGCGGCGGCATCGTCGACGTCTTCTCGCCGGCCCAGGCCGCGCCGGCACGGCTCGAGTTCTTCGGTGACGAGATCGAATCGATCAGGCTCTTCGATCCGACGTCACAGCGCTCGCAGGCCACGCTCGACGAGCTGCTCGTGCTTCCGTTGCACGACGAGGGCGTCGACGCGGGCGGGCGCGGCCTCCTCGACTATCTGCCGCCGACGGCCGCCGTGGTCGTCGACTCGCCGAAATTGCTCGACGCCACGGACGCGGAAGCGCCCGAGCGACCACCGCTCGCCCAGCGCATCGCCGGCCGCCAACGGGTGGAGCTGGAGCTGGTCGAGGGCGCCACCGGCCCGGCCGGTCTCACGCTCGACACGCGCTCGGTGACGCAGTACGCGGGGAAGTTCACCCAGCTGGCGGAGGAGATCGCCGGCTGGCGTCGCGAAGGCTTCACGGTGAGGCTGGCGGCGGCCGACGACCGGCAAGCCGAGCACGTCCAGCAGATCCTGCGTGAGCACGGCGTGGAGGCGCTGCGGGCCGCGGCTATCGACGCTCCCGAAGGACTGGCCATCGTCGTCGGCGAATGCTCGTCGGGATTCTCGATCCCCGCGCTCGGCCTGATCCTCCTCACCGAGACCGAGATGTTCGGCGCCCGGCGGCGCACGCTGCGGCGTCCGAAGTACCAGCGGGGCTCGCCCATCAGTGCCTTCACCGACCTCGAGGTCGGCGACCTCGTGGTCCACGAGGACCACGGTATCGGACGGTATCTCGGGCTCAAGACGATGGCGGTGGGTGACCGTGACGGCGACTTCCTGCTCCTCGAGTATGCCGAGAACAACCGTCTCTATCTCCCCGTCGATCGGCTCGACCTGATCTCGAAGTACATGGGCGGCGATGTCACCGCGGCGCGCCTCGACCGGCTGGGCGGCGCGTCCTGGCAGCGGGTGAAGGACTCCGTGCGCGCGGCCCTGCGGGAGATGGCCGAGGAGCTCCTCCGGCTCTACGCCAAGCGCACGGTTGCCGAGGGCCATCGCTTCGCGTCCGACACGCCCTGGCAGCGCGAGTTCGAGGCGGCGTTCCGGTTCGAGGAGACGACCGACCAGCTCCGCGCCATCGAGGACGCCAAGCGCGACATGGAAGGCGAGCGGCCAATGGACCGCCTCGTCGCCGGCGACGTCGGCTATGGCAAGACCGAGGTCGCGCTCCGCGCCGCGTTCAAGGCCGTGGCCGACGGCACCCAGGTCGCGGTGCTGGTCCCCACCACCGTGCTGGCTCAGCAGCACTGGTCGACGTTCGTGGATCGCTTCGGCGCGTTCCCGGCCAAGGTCGAGCTGCTCTCACGCTTCCGCTCGCCGGTCGAGCAGAAGGCCGTGGTCGAGGGACTCCGGCAGGGCACGGTCGACGTCGTCATCGGCACCCATCGCTTGCTTTCCAAGGACGTCGAGTTCAAGAACCTCGGCCTTCTGATCATCGACGAGGAGCATCGCTTCGGCGTCGCGCACAAGGAGCGCCTCAAACAGTTCCGGGCCGCGGTGGACGTGCTCGCGCTCACGGCCACGCCGATCCCCCGGACGCTGTACATGTCGCTCTCCGGTGTGCGTGACATGTCGGTGATCGAGACGCCACCGCTCGATCGGCTACCGGTGGACACCGTGCTCAGGCGTTTCTCGAAAGCCGTGATCAAGGAGGCGGTCGCTCGTGCCCGACGCGCGTATCGTCATGGCGCACGGCCAGATGCGCGAGCGTGA
PROTEIN sequence
Length: 745
MLSEWAAFSELAKAFAEGQACLRVAGLNGSARALAIAGLVQTQPRPLLVVAATLPDAHRWAQDLRFFGAPAVEFPEREPRLWRGGRQRESDAERAVVCRRLLAGESLVVVTTPAALDVTLPTPAAFRAATLRFTTGDSLDRELLVEALDKAGYERTETVVEVGQWSVRGGIVDVFSPAQAAPARLEFFGDEIESIRLFDPTSQRSQATLDELLVLPLHDEGVDAGGRGLLDYLPPTAAVVVDSPKLLDATDAEAPERPPLAQRIAGRQRVELELVEGATGPAGLTLDTRSVTQYAGKFTQLAEEIAGWRREGFTVRLAAADDRQAEHVQQILREHGVEALRAAAIDAPEGLAIVVGECSSGFSIPALGLILLTETEMFGARRRTLRRPKYQRGSPISAFTDLEVGDLVVHEDHGIGRYLGLKTMAVGDRDGDFLLLEYAENNRLYLPVDRLDLISKYMGGDVTAARLDRLGGASWQRVKDSVRAALREMAEELLRLYAKRTVAEGHRFASDTPWQREFEAAFRFEETTDQLRAIEDAKRDMEGERPMDRLVAGDVGYGKTEVALRAAFKAVADGTQVAVLVPTTVLAQQHWSTFVDRFGAFPAKVELLSRFRSPVEQKAVVEGLRQGTVDVVIGTHRLLSKDVEFKNLGLLIIDEEHRFGVAHKERLKQFRAAVDVLALTATPIPRTLYMSLSGVRDMSVIETPPLDRLPVDTVLRRFSKAVIKEAVARARRAYRHGARPDARA*