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13_1_40cm_scaffold_3154

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_scaffold_3154_1
unknown

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3..125
DNA (123bp) protein (41aa)

This feature has no annotations

13_1_40cm_scaffold_3154_2
Geodermatophilus obscurus, Geodermatophilus, Geodermatophilales, Actinobacteria, Actinobacteria, Bacteria

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122..559
DNA (438bp) protein (146aa)
Thioesterase superfamily protein n=1 Tax=Geodermatophilus obscurus (strain ATCC 25078 / DSM 43160 / JCM 3152 / G-20) RepID=D2SCB3_GEOOG
thioesterase superfamily protein
Thioesterase superfamily protein {ECO:0000313|EMBL:ADB76241.1}; TaxID=526225 species="Bacteria; Actinobacteria; Geodermatophilales; Geodermatophilaceae; Geodermatophilus.;" source="Geodermatophilus ob
13_1_40cm_scaffold_3154_3
Nitrospirillum amazonense, Nitrospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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559..1071
DNA (513bp) protein (171aa)
Acetyltransferase, GNAT family n=1 Tax=Azospirillum amazonense Y2 RepID=G1Y1F8_9PROT
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EGY00647.1}; TaxID=1003237 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Nitrospirillum.;" source="Nitro
N-acetyltransferase GCN5
13_1_40cm_scaffold_3154_4
RBG_16_RIF_CHLX_72_14_curated, RIF-CHLX, Bacteria

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comp(1013..1705)
DNA (693bp) protein (231aa)
Major facilitator superfamily MFS_1 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1CAD3_SPHTD
major facilitator superfamily protein Tax=RBG_16_RIF_CHLX_72_14_curated
major facilitator superfamily MFS_1
13_1_40cm_scaffold_3154_5
Thermomicrobium roseum, Thermomicrobium, Thermomicrobiales, Thermomicrobia, Chloroflexi, Bacteria

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2131..2901
DNA (771bp) protein (257aa)
Biotin/lipoate A/B protein ligase n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3Z4_THERP
biotin/lipoate A/B protein ligase
Biotin/lipoate A/B protein ligase {ECO:0000313|EMBL:ACM07046.1}; TaxID=309801 species="Bacteria; Chloroflexi; Thermomicrobiales; Thermomicrobiaceae; Thermomicrobium.;" source="Thermomicrobium roseum (
13_1_40cm_scaffold_3154_6
unknown

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comp(2906..3412)
DNA (507bp) protein (169aa)

This feature has no annotations

13_1_40cm_scaffold_3154_7
GWC2_RIF_CHLX_73_18_curated, RIF-CHLX, Bacteria

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3433..5007
DNA (1575bp) protein (525aa)
Transmembrane efflux protein id=4709197 bin=GWC2_Chloroflexi_73_18 species=Patulibacter medicamentivorans genus=Patulibacter taxon_order=Solirubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
EmrB/QacA subfamily drug resistance transporter Tax=GWC2_RIF_CHLX_73_18_curated
EmrB/QacA subfamily drug resistance transporter
13_1_40cm_scaffold_3154_8
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

Not on your lists

comp(5011..5937)
DNA (927bp) protein (309aa)
Glycine betaine/choline-binding protein of an ABC-type transport system Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Substrate-binding region of ABC-type glycine betaine transport system id=4709202 bin=GWC2_Chloroflexi_73_18 species=Intrasporangium calvum genus=Intrasporangium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
quaternary ammonium transporter
13_1_40cm_scaffold_3154_9
Salinisphaera hydrothermalis, Salinisphaera, Salinisphaerales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6057..6764)
DNA (708bp) protein (236aa)
hypothetical protein n=1 Tax=Kushneria aurantia RepID=UPI00037C277F
Binding-protein-dependent transporter system inner membrane protein {ECO:0000313|EMBL:KEZ78419.1}; TaxID=1304275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Salinisphaerales; Salinisphaera
ABC transporter permease
13_1_40cm_scaffold_3154_10
RLO_RIF_CHLX_71_12, Chloroflexi, Bacteria

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comp(6761..7438)
DNA (678bp) protein (226aa)
osmoprotectant transport system permease protein Tax=RIFCSPLOWO2_12_FULL_RIF_CHLX_71_12_curated
Binding-protein-dependent transport systems inner membrane component id=4709198 bin=GWC2_Chloroflexi_73_18 species=Thermomonospora curvata genus=Thermomonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWC2_Chloroflexi_73_18 organism_group=Chloroflexi organism_desc=Good +
binding-protein-dependent transport systems inner membrane component
13_1_40cm_scaffold_3154_11
Rubrobacter radiotolerans, Rubrobacter, Rubrobacterales, Rubrobacteria, Actinobacteria, Bacteria

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7460..8443
DNA (984bp) protein (328aa)
ABC transporter related n=1 Tax=Rubrobacter xylanophilus (strain DSM 9941 / NBRC 16129) RepID=Q1AXC7_RUBXD
proV: glycine betaine/L-proline transport ATP binding subunit
ProV: glycine betaine/L-proline transport ATP binding subunit {ECO:0000313|EMBL:AHY46179.1}; TaxID=42256 species="Bacteria; Actinobacteria; Rubrobacteria; Rubrobacterales; Rubrobacterineae; Rubrobacte
13_1_40cm_scaffold_3154_12
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8427..9638
DNA (1212bp) protein (404aa)
Putative pyridine nucleotide-disulphide oxidoreductase n=1 Tax=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) RepID=Q9X8C3_STRCO
Variovorax paradoxus strain MEDvA23 contig_32, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ31548.1}; TaxID=34073 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamona
SCE36.10c; pyridine nucleotide-disulfide oxidoreductase
Displaying 12 items

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