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MEL_B2_4_38

Organism: MEL.B2

near complete RP 53 / 55 MC: 14 BSCG 50 / 51 ASCG 0 / 38
Location: comp(38585..39166)

Top 3 Functional Annotations

Value Algorithm Source
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29) iprscan interpro
DB: TMHMM
  • Identity: null
  • Coverage: null
  • Bit_score: null
(db=HMMPfam db_id=PF06835 from=30 to=155 evalue=9.9e-08 interpro_id=IPR010664 interpro_description=Lipopolysccharide assembly, LptC-related) iprscan interpro
DB: HMMPfam
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 9.90e-08
PROKAR_LIPOPROTEIN (db=ProfileScan db_id=PS51257 from=1 to=19 evalue=7.0) iprscan interpro
DB: ProfileScan
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 7.00e+00

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Taxonomy

Clostridium sp. CAG:306 → Melainabacteria → Bacteria

Sequences

DNA sequence
Length: 582
ATGTCAAAACGAAAAATAACCTATATCGTAATACTTTCGCTGGTAGTTCTGGGCTGTGCCTGGGCATTTATCAGTGCCGGTGTGATTACAAAGAATTTTAAAAAAGAAGCAATCAATAATGCCGGCGAAAAACAAAAGCTCAACATAGAAAACCTTATTATTACAGAGACAAAAGAGGACAAAAAATACTGGGAGCTTTATGCAGAATCCGGTTATTATGACAGTCAGAACAAGGTTGCCATTTTGTATAATGTCATTGGCAATTTTTATGATGATGACAAAGTTGTTTTGAGTATGGAGTCTTCAAAAGGTACTTTTAGTGAAGAGACCAAAAAAGTAGTTCTGTACGAAAATTCGTATTTTATTTATAAAGACGGAACCGATGTGCGTGCCGACAGATTTGTTTGGCAGGGCAATGACAAAGACATTGTTGCACAGGGTAATGTTATAATCAGAAGAAACGGTGAATTAAGAACTTTCAGCAATGAAGCGGTGCTTACAAATCAGATGACAAGTGTAAGAATCAAAGGCCGCTCAAAAACAGAGCTGTACAGTAAGGGGAATTTTGATGAAAAATTTTAA
PROTEIN sequence
Length: 194
MSKRKITYIVILSLVVLGCAWAFISAGVITKNFKKEAINNAGEKQKLNIENLIITETKEDKKYWELYAESGYYDSQNKVAILYNVIGNFYDDDKVVLSMESSKGTFSEETKKVVLYENSYFIYKDGTDVRADRFVWQGNDKDIVAQGNVIIRRNGELRTFSNEAVLTNQMTSVRIKGRSKTELYSKGNFDEKF*