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SCNpilot_BF_INOC_scaffold_3397_6

Organism: SCNpilot_BF_INOC_Thiobacillus_strain1_63_62

near complete RP 46 / 55 MC: 1 BSCG 42 / 51 MC: 1 ASCG 11 / 38
Location: comp(4246..5721)

Top 3 Functional Annotations

Value Algorithm Source
ribulose-bisphosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] id=12493632 bin=THIO_HI species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 492.0
  • Bit_score: 1001
  • Evalue 2.70e-289
ribulose-bisphosphate carboxylase (EC:4.1.1.39) similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 489.0
  • Bit_score: 942
  • Evalue 4.10e-272
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338};; TaxID=4 similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 489.0
  • Bit_score: 942
  • Evalue 2.10e-271

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Taxonomy

Nitrosococcus halophilus → Nitrosococcus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1476
ATGGCATCGCAAACTATCAAGGAAGGCAAGGAACGTTACAAGTCGGGTGTGATTCCGTACAAGAAGATGGGCTACTGGGAACCGGATTACAAGCCCAAGGATACTGACGTGATCGCGCTGTTCCGCATCACCCCGCAGGAAGGCGTCGACCCCGAAGAAGCCGCTGCCGCCGTCGCGGGAGAATCGTCGACCGCGACGTGGACGGTGGTGTGGACCGACCGCCTGACCGCCTGCGAGCTTTATCGCGCCAAGGCGTATCGCGTGGATCCTGTCCCCAATACCGGTGCCGGCACCAAGAACGAAGCGCAGTATTTCGCCTATATCGCCTATGACCTCGACCTCTTCGAGCCGGGTTCGATCGCCAACCTGACCGCGTCGATCATCGGCAACGTGTTCGGCTTCAAGGCGGTGAAGGCACTGCGCCTCGAAGACATGCGCATTCCCGTCGCCTATCTGAAGACCTTCCAGGGCCCGGCAACCGGCATCGTGGTCGAGCGCGAGCGCCTCGACAAATTCGGCCGCCCCCTGCTGGGCGCCACCACCAAACCCAAGCTCGGGTTGTCGGGCCGCAACTACGGCCGCGTGGTGTACGAAGCATTGAAAGGCGGCCTCGACTTCGTGAAGGACGACGAGAACATCAACTCGCAGCCCTTCATGCACTGGCGCGACCGTTTCCTGTATTGCATGGAAGCGGTGAACAAGGCCTCGGCCGCTACCGGCGAAGTCAAGGGTCATTACCTCAACGTCACCGCCGGCACCATGGAGGAGATGTACGAACGCGCCGAATTCGCCAGGAACCTGGGATCGGTGATTGTCATGATCGACCTGGTCATCGGCTATACCGCGATCCAGAGCATGGCGAAATGGGCGCGCAAGAACGACATGATCCTGCACCTGCACCGCGCCGGAAACTCGACCTACTCACGTCAGAAGAATCACGGCATGAATTTCCGCGTGATCTGCAAATGGATGCGCATGGCGGGCGTCGATCACATTCATGCCGGCACCGTCGTGGGCAAGCTCGAGGGCGATCCGCTGATGATCAAGGGCTTCTATGACACCCTGCGGGACACGCATACGCCGATGAGCCTGGAAAACGGCCTGTTCTTCGACCAGGACTGGGCTTCGCTCAACAAGGTCATGCCGGTCGCTTCCGGCGGCATTCACGCAGGCCAGATGCACCAGTTGCTGACCTATCTCGGCGAAGACGTGATCCTGCAGTTCGGCGGCGGCACCATCGGCCACCCGCAGGGTATCCAGGCCGGCGCCACGGCGAATCGCGTGGCACTTGAAGCGATGGTGATGGCGCGCAACGAGGGCCGCGACATCTGGAACGAAGGGCCGCAGATTCTGGAGGCCGCAGCCAAATGGTGCACGCCGCTCAGGGCTGCCCTCGACACGTGGAAGGACATCACCTTCAACTACGCGTCGACCGATACCGCCGATTTTGTGCCCACCGCTACGGCCAGCGTTTGA
PROTEIN sequence
Length: 492
MASQTIKEGKERYKSGVIPYKKMGYWEPDYKPKDTDVIALFRITPQEGVDPEEAAAAVAGESSTATWTVVWTDRLTACELYRAKAYRVDPVPNTGAGTKNEAQYFAYIAYDLDLFEPGSIANLTASIIGNVFGFKAVKALRLEDMRIPVAYLKTFQGPATGIVVERERLDKFGRPLLGATTKPKLGLSGRNYGRVVYEALKGGLDFVKDDENINSQPFMHWRDRFLYCMEAVNKASAATGEVKGHYLNVTAGTMEEMYERAEFARNLGSVIVMIDLVIGYTAIQSMAKWARKNDMILHLHRAGNSTYSRQKNHGMNFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMIKGFYDTLRDTHTPMSLENGLFFDQDWASLNKVMPVASGGIHAGQMHQLLTYLGEDVILQFGGGTIGHPQGIQAGATANRVALEAMVMARNEGRDIWNEGPQILEAAAKWCTPLRAALDTWKDITFNYASTDTADFVPTATASV*