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SCNpilot_BF_INOC_scaffold_0_138

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: comp(159955..160632)

Top 3 Functional Annotations

Value Algorithm Source
Two component transcriptional regulator, winged helix family n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TPN8_ALKMQ similarity UNIREF
DB: UNIREF100
  • Identity: 71.6
  • Coverage: 225.0
  • Bit_score: 325
  • Evalue 3.90e-86
two component transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 71.6
  • Coverage: 225.0
  • Bit_score: 325
  • Evalue 1.10e-86
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ABR48156.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" sourc similarity UNIPROT
DB: UniProtKB
  • Identity: 71.6
  • Coverage: 225.0
  • Bit_score: 325
  • Evalue 5.50e-86

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Taxonomy

Alkaliphilus metalliredigens → Alkaliphilus → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 678
ATGAGAATTTTACTAGTCGAAGATGAAAAGCATTTGGCTGAGGCAATCTCACAAATCCTAAAAAAGAACAATTATACAGTAGATATGGTTCACGACGGAGAAGATGGACTGGATTATGCACTGAGCGATATATACGATTTAATTTTGCTGGATATTATGTTGCCAAAATTAAATGGAATTGAGGTACTTAAAGAAATAAGAAAAGAAGGCATTTCTGTACCGGTATTGATGCTAACTGCTAAAGGTGAGATCAGCGATCGCGTTACTGGACTCGATAGTGGCGCAGATGATTATTTACCAAAGCCATTTGCCACTGAAGAGCTGCTTGCCAGAATCAGAGCTTTGTCTAGAAGAAAAAGTGAGGTGCCAACTACAGATGACCTAGAGTTTGGCGATATAACCTTAACCCCCTCTACGTTAATGCTGACGAAAGGCGCTACAGAAATCAAGCTAACGCTTAGAGAATGTGAGCTAATGGAGTTTTTAATCCTTAGAAAAGGGCTCATCGCCTCTAAAGAAATGATAATTGATAAGCTTTGGGGATTTGACTCTGAAGCTGAACACAACAATGTCGAAGTTTATATCTCTTTTTTAAGAAAAAAATTGAGTTTTTTAAAATCTAATGTGGTCATATCAACTACGCGAGGTGTAGGGTATGCACTGGAGGTCAATAAGTAA
PROTEIN sequence
Length: 226
MRILLVEDEKHLAEAISQILKKNNYTVDMVHDGEDGLDYALSDIYDLILLDIMLPKLNGIEVLKEIRKEGISVPVLMLTAKGEISDRVTGLDSGADDYLPKPFATEELLARIRALSRRKSEVPTTDDLEFGDITLTPSTLMLTKGATEIKLTLRECELMEFLILRKGLIASKEMIIDKLWGFDSEAEHNNVEVYISFLRKKLSFLKSNVVISTTRGVGYALEVNK*