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SCNpilot_BF_INOC_scaffold_0_461

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 496815..498230

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DS52_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 49.2
  • Coverage: 476.0
  • Bit_score: 451
  • Evalue 7.50e-124
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:CDA90405.1}; TaxID=1263011 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:238.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 49.2
  • Coverage: 476.0
  • Bit_score: 451
  • Evalue 1.10e-123
RNA polymerase, sigma 54 subunit, RpoN/SigL similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 471.0
  • Bit_score: 446
  • Evalue 8.90e-123

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Taxonomy

Firmicutes bacterium CAG:238 → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 1416
ATGAAGATGAATTTTAATCTAAATCTGATTCAAACTCAAAAACTCATCATGACCCCTGAATTGAAACAGGCAATCGAAATCCTTCAATTCAATGCAGTTGAGTTAAATGAGTTTATTAATGAGGAGCTATTAAACAACCCAATTTTAGAAAGAACTGCCTCGGAATCTGACGACGAGCTCTATGGTGAAAAATCTGACCAAGAGTTTGAGTACGATCTAGACAAAGGGGACAAACAGGAGATGGATTGGGAAGATATGGTCAATTATTTTGACGATGTAAGACCAATGGCGAATACAACCTATAATTCCGACAACGACATTAATTATGACAATTTTGTTGCTGATGAAGAAAATCTAAAAGACTATTTGTTAATGCAGCTTAAATTTTCAAAGCTTGATCACGACGTGATGAAGATCGGAGAATATATAATAGAAAATATAGATGACAATGGTTATCTAAAAATGAACAATGACGAAGCGATGATTTTGTTCAACCGCTCAAATGAAGAAATAGAACAGGTCGTAAGACTTGTTCAAACATTTGATCCGCCAGGTGTTGGTGCTCGAAGTCTGAAGGAATGTTTGTTGATTCAGCTTTATCAACAGGGTTATGAAGAGAGCTTAGAAGAAACCTTGGTTACAGATCACTTAGAAGAGCTTGGCGAGAAAAAATTTGCACAAATCGCTAAAAAGCTAAACGAAACAGCAGAGCGCGTCCAACTATCCTATGACTATATTAAAACCCTTGAACCTAAGCCAGGAAGATCATTTAGCTCTTTAAGAGATGTCAGATATGTAATACCCGATGTATTTGTAGAAAAGGAAAAGGATGAATATGTCGTTAATGTAAATGAAAGTGCTTCGCCAAGACTACAGATCAACGGCTTTTATAAAAATATGCTAAATCAATTTACGAGAGATTCCTTGACAAATGATTATTTGTCAAAGAACTTGCAGTCTGCTCTAAGAATCATTAAAAGTATAGAACAAAGAAGAAATACCATCTATCGCGTATGTAAAGCAATTGTTGAATACCAATATGATTTTTTTGAAAAGGGATTGCTTTATTTAAAGCCATTAAATCTTAAAGACATTGCCGATGAAATCGAAGTACATGAATCGACGGTTTCAAGAGCTGTAAATGGAAAGTACATGCAGTGTCCAAATGGTCTATTTGAAATAAAGTACTTTTTCCAAAGTGGAGTAAAAGGTGCTAGTGGTGAGGGTGTATCCTCTGAAAGTGTAAAGCTGGTCATGAAAGAAATGATCGATAAAGAAGACACAAAGAAACCACTTAGTGATCAATATCTTGCTGACGAGCTCAACAAAACTGGTATCAATATTTCAAGAAGAACAGTTGCGAAATATCGTGATGAATTAAACATACCACCTTCATCGAAAAGAAAGCGATTTTAA
PROTEIN sequence
Length: 472
MKMNFNLNLIQTQKLIMTPELKQAIEILQFNAVELNEFINEELLNNPILERTASESDDELYGEKSDQEFEYDLDKGDKQEMDWEDMVNYFDDVRPMANTTYNSDNDINYDNFVADEENLKDYLLMQLKFSKLDHDVMKIGEYIIENIDDNGYLKMNNDEAMILFNRSNEEIEQVVRLVQTFDPPGVGARSLKECLLIQLYQQGYEESLEETLVTDHLEELGEKKFAQIAKKLNETAERVQLSYDYIKTLEPKPGRSFSSLRDVRYVIPDVFVEKEKDEYVVNVNESASPRLQINGFYKNMLNQFTRDSLTNDYLSKNLQSALRIIKSIEQRRNTIYRVCKAIVEYQYDFFEKGLLYLKPLNLKDIADEIEVHESTVSRAVNGKYMQCPNGLFEIKYFFQSGVKGASGEGVSSESVKLVMKEMIDKEDTKKPLSDQYLADELNKTGINISRRTVAKYRDELNIPPSSKRKRF*