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SCNpilot_BF_INOC_scaffold_17_160

Organism: SCNpilot_BF_INOC_Clostridium_37_18

near complete RP 48 / 55 MC: 5 BSCG 50 / 51 MC: 4 ASCG 14 / 38 MC: 4
Location: 165556..166428

Top 3 Functional Annotations

Value Algorithm Source
RND family efflux transporter, MFP subunit n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TVV2_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 34.3
  • Coverage: 254.0
  • Bit_score: 129
  • Evalue 6.90e-27
RND family efflux transporter, MFP subunit {ECO:0000313|EMBL:EKQ56850.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour similarity UNIPROT
DB: UniProtKB
  • Identity: 34.3
  • Coverage: 254.0
  • Bit_score: 129
  • Evalue 9.70e-27
RND family efflux transporter MFP subunit similarity KEGG
DB: KEGG
  • Identity: 31.8
  • Coverage: 289.0
  • Bit_score: 126
  • Evalue 9.60e-27

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Taxonomy

Clostridium sp. Maddingley MBC34-26 → Clostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 873
ATGATTAGAAAAAGAGTTTTGAAGACAATTGGGATTTGTTTGATCATGACAATTGCTTTATCTGCCTGTCAAGCTGATGAATCACCCAAAGTGATAGATAAGGTTAAACAAGTAACCGTCGTAACGCTTAAAGAAACTGCCTTAAGAGAGACACTCGTTTATGATGCTGCAGTTACAGCTGAGCAAATTACACCTTTAAATCCTAGTAGGGATGGTGAAGTGGAGGCAATCTTTAAACAGGTTGATGATAAAGTTAAAATGGGCGATAAGCTACTGACACTTAAGGCATACGCTCAGGGGGAAAAGAATTTAGATATTTATGCACCTTACGAGGGGGTTGTTGCAAGTGTTTTAACCACAGAAGGTAGCTTAGTCTCCTCAGCTTATCCTGCAATAATTATTAGAAGTAATTCTCAAAGCTTAAAATTTGCAATAACACTTGGGGACGTCAAAAAGATACAAAAATATGGTGAGCCACAAGTAGAAATTCAAGCTGACGATAAGATTTATGAAGGAAAATTTGAACAGCTTAGCCAGCTTCCAGACAGTACATCGTTGATGTACCCAATAGATGTTTCAGTAACCGATACTCATCAGTTTAAAATAGGTGAAATCGTCAAAGTCAATTTATTACTCTCAAGGGTAAATGGGATCTGGTTACCGATCCCTTATATTCAAAACGATGGAGATGACTATGTCTATATAGTAAATTCAGATTCTCGTGTGGAGAAAAAGAATATCACTTTAAAAGAGGTAAATGACGATTTGGTTCATGTAATTGGTTTAAATGATGGCGATCGTGTGATTACAATTGGAAATGCCTTTGTAAAAGAAGGACAATTGGTAAATGCTAGGGAGGCAACCAATGAATAG
PROTEIN sequence
Length: 291
MIRKRVLKTIGICLIMTIALSACQADESPKVIDKVKQVTVVTLKETALRETLVYDAAVTAEQITPLNPSRDGEVEAIFKQVDDKVKMGDKLLTLKAYAQGEKNLDIYAPYEGVVASVLTTEGSLVSSAYPAIIIRSNSQSLKFAITLGDVKKIQKYGEPQVEIQADDKIYEGKFEQLSQLPDSTSLMYPIDVSVTDTHQFKIGEIVKVNLLLSRVNGIWLPIPYIQNDGDDYVYIVNSDSRVEKKNITLKEVNDDLVHVIGLNDGDRVITIGNAFVKEGQLVNAREATNE*