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qs_6_scaffold_1290

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
qs_6_scaffold_1290_1
Rhodococcus sp. MEB064, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(2..505)
DNA (504bp) protein (168aa)
3-phenylpropionate dioxygenase subunit beta (Digoxigenin subunit beta) n=1 Tax=Salinibacterium sp. PAMC 21357 RepID=UPI00028A3FC9
Contig_74, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ08071.1}; TaxID=1587522 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus sp. MEB064.
aromatic-ring-hydroxylating dioxygenase subunit beta
qs_6_scaffold_1290_2
Streptomonospora alba, Streptomonospora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

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comp(534..1946)
DNA (1413bp) protein (471aa)
3-phenylpropionate dioxygenase subunit alpha (Digoxigenin subunit alpha) (EC:1.14.12.19) rbh
3-phenylpropionate dioxygenase subunit alpha (Digoxigenin subunit alpha) n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9L3H7_THERP
Uncharacterized protein {ECO:0000313|EMBL:KIH99066.1}; TaxID=183763 species="Bacteria; Actinobacteria; Streptosporangiales; Nocardiopsaceae; Streptomonospora.;" source="Streptomonospora alba.;"
qs_6_scaffold_1290_3
Kyrpidia tusciae, Kyrpidia, Bacillales, Bacilli, Firmicutes, Bacteria

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1954..2802
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Bacillus massiliosenegalensis RepID=UPI00031B2346
peptidase M24
Peptidase M24 {ECO:0000313|EMBL:ADG05233.1}; TaxID=562970 species="Bacteria; Firmicutes; Bacilli; Bacillales; Alicyclobacillaceae; Kyrpidia.;" source="Kyrpidia tusciae (strain DSM 2912 / NBRC 15312 /
qs_6_scaffold_1290_4
unknown

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comp(2952..3164)
DNA (213bp) protein (71aa)

This feature has no annotations

qs_6_scaffold_1290_5
unknown

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3476..3604
DNA (129bp) protein (43aa)

This feature has no annotations

qs_6_scaffold_1290_6
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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3807..5051
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SPU7_9EURY
Amino acid-binding protein {ECO:0000313|EMBL:ELZ28760.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source="Halogeometricum pallidu
livJ2; ABC-type transport system periplasmic substrate-binding protein (probable substrate branched-chain amino acids)
qs_6_scaffold_1290_7
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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5110..6153
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SP39_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ELZ88707.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Halofe
livH9; branched-chain amino acid ABC transporter permease
qs_6_scaffold_1290_8
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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6227..7306
DNA (1080bp) protein (360aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0SHP3_9EURY
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:ELZ28758.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halogeometricum.;" source=
livM2; ABC-type transport system permease protein (probable substrate branched-chain amino acids)
qs_6_scaffold_1290_9
Haloferax sulfurifontis, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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7308..8120
DNA (813bp) protein (271aa)
ABC transporter n=2 Tax=Haloferax RepID=M0HVR7_9EURY
ABC transporter {ECO:0000313|EMBL:ELZ88705.1}; TaxID=662480 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax sulfurifontis ATCC BAA-897.;"
livG2; ABC-type transport system ATP-binding protein (probable substrate branched-chain amino acids)
qs_6_scaffold_1290_10
Halogeometricum pallidum, Halogeometricum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

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8120..8827
DNA (708bp) protein (236aa)
Uncharacterized protein n=1 Tax=haloarchaeon 3A1_DGR RepID=T0TYR2_9EURY
ABC transporter, high-affinity branched-chain amino acid transport ATP-binding protein LivF {ECO:0000313|EMBL:ELZ28756.1}; TaxID=1227487 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; H
livF1; putative branched-chain amino acids ABC transporter ATP-binding protein
qs_6_scaffold_1290_11
unknown

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comp(8806..9558)
DNA (753bp) protein (251aa)

This feature has no annotations

qs_6_scaffold_1290_12
Natronorubrum tibetense, Natronorubrum, Natrialbales, Halobacteria, Euryarchaeota, Archaea

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9586..10473
DNA (888bp) protein (296aa)
Beta-lactamase n=1 Tax=Natronorubrum tibetense GA33 RepID=L9W0S2_9EURY
Beta-lactamase {ECO:0000313|EMBL:ELY41918.1}; TaxID=1114856 species="Archaea; Euryarchaeota; Halobacteria; Natrialbales; Natrialbaceae; Natronorubrum.;" source="Natronorubrum tibetense GA33.;"
beta-lactamase
Displaying 12 items

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