ggKbase home page

sw_11_scaffold_445_1

Organism: SW_11_UNK

megabin RP 48 / 55 MC: 40 BSCG 43 / 51 MC: 37 ASCG 38 / 38 MC: 38
Location: comp(40..1320)

Top 3 Functional Annotations

Value Algorithm Source
Dentin matrix protein 1 (Fragment) n=1 Tax=Peromyscus mexicanus RepID=Q6WST0_PERMX similarity UNIREF
DB: UNIREF100
  • Identity: 25.4
  • Coverage: 181.0
  • Bit_score: 66
  • Evalue 8.00e-08
Dentin matrix protein 1 {ECO:0000313|EMBL:AAQ02299.1}; Flags: Fragment;; TaxID=56213 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Gl similarity UNIPROT
DB: UniProtKB
  • Identity: 25.7
  • Coverage: 179.0
  • Bit_score: 66
  • Evalue 1.10e-07

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Reithrodontomys fulvescens → Reithrodontomys → Rodentia → Mammalia → Chordata → Metazoa

Sequences

DNA sequence
Length: 1281
ATGAGGCAAGCGAACAGGCCATATCGTTATACGAAAGAGGCTGTACCGCCTTCGCAGGAAGTTCTTCTGCTCTATGCGGAAGATGAGCTACCCGGGCATGAAAAGGATGAAGTAGCTGCTTTTCTCCGCGACCATCCTTTATATGCTGAAGCTACAAAAGGCCTGACCGGCTCTAAGGAACCCGGTGATAATGATCGAGACCAAACCAATGAGAGCCGCGACTTATTGGAAAATTATCACCGGATACCCGCATTTGATAAAGACGAATCAATGGCAATGGAGGCAGATGATGGGGGCACCAGAGATTATCATCCAAAGTCCGGTAAAATACGCAGTGAGGTTGAGCAAATCAATAACAAGATCGACATCATCACATCGCAGGACCAAAAAGGCCGCAAAAAGACCGTTTCGATTCCCATCTGGCGTTATGTAGCTGCTGCCATTCTGGTGTTGCTGATGGGGTTTGCCGGGTACTTCCTCACGGTCCTACTCAATCAGCAACCGCCAGCCGTCCTGTCCGAGAAGCAAAGTGAGGATGAAACACCGGAAGGGCCCGTTGCAAGTGATGAGCGAGATCAAGAAACCACCGGGGGTAATCAAGAAGCAGAACTTAAACCTCTTGACGAGGAAACAGCATCGGATCAAGAACAAGCTGATGATCAAAAGCAAGGAACGAAATCTGAAAAGCCGGTAATAGATTCAAAAGCGGATGACCAATCCACAGGCACAAGGAAGCAAAACAAGGGAACTGCGGATGAAGATGCTGCTGATGGCCCACAATCAACCAAAAAGGAAGAGTCCGCTTCATCGGGCTCCGGCAAAGCGTTGCAAGATGGAGAAGCTGGTGATGATGGGCCATCCGGCTCGAGAAGAATGCGGCAACAAGAGGCGCAAGCTTACCAGGCTAATCCTGAAGCAAGAGAGGAATCCCCATCGTTAGCCAATGGCATGGAGCGGTTTCAACAGGAAGACTACAGTGCTGCACTCAAGGCATTTGCTGCCGTTATCGAGGACCAGCCGGAGAATCTCAAAGCGCGCTATTATGCGGGCTTATCCGCTCTTGAGCTCGAGCAGTTCGCTACGGCCCTTGCTCATTTCAACTATTTGGTAGGCCCTGAGCCGCGCCACACGTATTTTGAAGACGCCCTTTGGCAGCTCGGTCAAGCATACTTACGTAAGGGTGATACCTCCCAAGCAAAAAGAGTTTATGAGCGCATTGAAGAACACCGCTACAAACATTACGATAAGGCGGTCAAGAAGCTCGAGCGTTGGCGCAATTAA
PROTEIN sequence
Length: 427
MRQANRPYRYTKEAVPPSQEVLLLYAEDELPGHEKDEVAAFLRDHPLYAEATKGLTGSKEPGDNDRDQTNESRDLLENYHRIPAFDKDESMAMEADDGGTRDYHPKSGKIRSEVEQINNKIDIITSQDQKGRKKTVSIPIWRYVAAAILVLLMGFAGYFLTVLLNQQPPAVLSEKQSEDETPEGPVASDERDQETTGGNQEAELKPLDEETASDQEQADDQKQGTKSEKPVIDSKADDQSTGTRKQNKGTADEDAADGPQSTKKEESASSGSGKALQDGEAGDDGPSGSRRMRQQEAQAYQANPEAREESPSLANGMERFQQEDYSAALKAFAAVIEDQPENLKARYYAGLSALELEQFATALAHFNYLVGPEPRHTYFEDALWQLGQAYLRKGDTSQAKRVYERIEEHRYKHYDKAVKKLERWRN*