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ACD1_33

Alias: ACD1_650.3984.81

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Displaying 4 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
ACD1_33_1

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comp(50..265)
DNA (216bp) protein (72aa)
cold-shock DNA-binding domain-containing protein; K03704 cold shock protein (beta-ribbon, CspA family) (db=KEGG evalue=8.0e-09 bit_score=62.4 identity=53.12 coverage=86.1111111111111)
CSD (db=HMMPfam db_id=PF00313 from=3 to=66 evalue=1.2e-18 interpro_id=IPR002059 interpro_description=Cold-shock protein, DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
Nucleic acid-binding proteins (db=superfamily db_id=SSF50249 from=1 to=68 evalue=1.4e-16 interpro_id=IPR016027 interpro_description=Nucleic acid-binding, OB-fold-like)
Cold shock protein, CspA type (db=HMMPIR db_id=PIRSF002599 from=1 to=68 evalue=4.4e-15 interpro_id=IPR012156 interpro_description=Cold shock, CspA GO=Molecular Function: nucleic acid binding (GO:0003676))
ACD1_33_2

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523..2481
DNA (1959bp) protein (653aa)
UvrABC system protein B n=1 Tax=Carboxydothermus hydrogenoformans Z-2901 RepID=UVRB_CARHZ (db=UNIREF evalue=0.0 bit_score=814.0 identity=62.17 coverage=98.6217457886677)
uvrB; excinuclease ABC subunit B
uvrB; excinuclease ABC subunit B
coiled-coil (db=Coil db_id=coil from=617 to=638 evalue=NA)
ACD1_33_3
RHI_RIF_OD1_07_40_12, RIF-OD1-7, Parcubacteria, Bacteria

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3012..3569
DNA (558bp) protein (186aa)
3012..3569 + (rbs_motif=AAAA rbs_spacer=10bp)
seg 74..81 Tax=RIFCSPHIGHO2_12_FULL_RIF_OD1_07_40_12_curated
ACD1_33_4
ACD1, ACD1, ACD1, ACD1, Parcubacteria, Bacteria

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comp(3958..4050)
DNA (93bp) protein (31aa)
seg (db=Seg db_id=seg from=16 to=28)
Displaying 4 items

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