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NECEvent2014_4_3_Actinomyces_59_538_scaffold_21

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_1
unknown

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2..151
DNA (150bp) protein (50aa)

This feature has no annotations

NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_2
unknown

Not on your lists

148..360
DNA (213bp) protein (71aa)

This feature has no annotations

NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_3
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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404..1249
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule rbh
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Actinomyces georgiae F0490 RepID=J1H0L4_9ACTO rbh
uroporphyrin-III C/tetrapyrrole methyltransferase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_4
Actinobaculum massiliense, Actinobaculum, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1270..1848)
DNA (579bp) protein (193aa)
pncA; putative nicotinamidase (EC:3.5.1.19)
Nicotinamidase n=1 Tax=Actinomyces sp. oral taxon 180 str. F0310 RepID=E6KRS4_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EKU94964.1}; TaxID=883066 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinobaculum.;" source="Actinobaculum massiliense ACS-171-V-C
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_5
Actinomyces neuii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1983..2918
DNA (936bp) protein (312aa)
oxidoreductase, aldo/keto reductase family protein (EC:1.1.1.91)
Uncharacterized protein n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0YTA3_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EJZ86708.1}; TaxID=888439 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces neuii BVS029A5.;" rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_6
Actinomyces sp. S4-C9, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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2976..4781
DNA (1806bp) protein (602aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_00098, ECO:0000256|SAAS:SAAS00001323};; Methionyl-tRNA synthetase {ECO: rbh
Methionine--tRNA ligase n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0YUF4_9ACTO rbh
methionyl-tRNA synthetase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_7
unknown

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comp(4795..5097)
DNA (303bp) protein (101aa)

This feature has no annotations

NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_8
Actinomyces sp. ICM47, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5108..6670)
DNA (1563bp) protein (521aa)
PspC family transcriptional regulator n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B4DE85
PspC domain protein {ECO:0000313|EMBL:EJG15396.1}; TaxID=936548 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. ICM47.;"
PspC domain-containing protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_9
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

6703..7896
DNA (1194bp) protein (398aa)
PspC family transcriptional regulator n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B44437 rbh
Sensory histidine kinase UhpB {ECO:0000313|EMBL:CRH70579.1}; TaxID=813 species="Bacteria; Chlamydiae; Chlamydiales; Chlamydiaceae; Chlamydia/Chlamydophila group; Chlamydia.;" source="Chlamydia trachom rbh
sensor histidine kinase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_10
Actinomyces turicensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

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7910..8560
DNA (651bp) protein (217aa)
Uncharacterized protein n=1 Tax=Actinomyces turicensis ACS-279-V-Col4 RepID=K0YQP6_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EJZ85793.1}; TaxID=883077 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces turicensis ACS-279-V-Col4.; rbh
LuxR family transcriptional regulator
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_11
Actinomyces massiliensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8568..9356)
DNA (789bp) protein (263aa)
hypothetical protein n=1 Tax=Actinomyces massiliensis RepID=UPI000312DF69
Uncharacterized protein {ECO:0000313|EMBL:EJF36991.1}; TaxID=1125718 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces massiliensis F0489.;"
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_12
Actinomyces sp. oral taxon 448, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9361..9900)
DNA (540bp) protein (180aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B58FBB
Uncharacterized protein {ECO:0000313|EMBL:EGQ74420.1}; TaxID=888056 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 448 str. F04
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_13
Actinomyces massiliensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9897..10307)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Varibaculum cambriense RepID=UPI0003B6F1FA
Uncharacterized protein {ECO:0000313|EMBL:EJF37006.1}; TaxID=1125718 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces massiliensis F0489.;"
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_14
Actinomyces sp. oral taxon 448, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10350..11480)
DNA (1131bp) protein (377aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 448 str. F0400 RepID=F9EER8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EGQ74418.1}; TaxID=888056 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. oral taxon 448 str. F04
hypothetical protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_15
unknown

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comp(11496..11777)
DNA (282bp) protein (94aa)

This feature has no annotations

NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_16
Actinomyces sp. oral taxon 877, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11929..14196
DNA (2268bp) protein (756aa)
Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 178 str. F0338 RepID=E8JH75_9ACTO rbh
LPXTG-motif protein cell wall anchor domain protein {ECO:0000313|EMBL:ERH33234.1}; TaxID=1227264 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyce rbh
metallophosphatase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_17
Actinomyces odontolyticus, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14245..16788
DNA (2544bp) protein (848aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=411466 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Ac rbh
ATP-dependent DNA helicase PcrA n=1 Tax=Actinomyces odontolyticus ATCC 17982 RepID=A7BEU0_9ACTO rbh
ATP-dependent DNA helicase PcrA
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_18
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16910..18121
DNA (1212bp) protein (404aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; rbh
sucC; succinyl-CoA synthetase subunit beta (EC:6.2.1.5)
succinyl-CoA synthetase subunit beta n=1 Tax=Actinomyces sp. ph3 RepID=UPI0003164359 rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_19
Actinomyces cardiffensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

18148..19068
DNA (921bp) protein (307aa)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699};; TaxID=888050 species="Bacteria; Actinobacteria; Actinomycetales; Actinomyc rbh
sucD; succinate--CoA ligase (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Actinomyces cardiffensis F0333 RepID=N6X1U6_9ACTO rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_20
Actinomyces sp. S6-Spd3, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19162..20901
DNA (1740bp) protein (580aa)
membrane protein n=1 Tax=Actinomyces vaccimaxillae RepID=UPI0003B63BB7 rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF00400.1}; TaxID=1284680 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces sp. S6-Spd3.;" rbh
hypothetical protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_21
Actinomyces sp. oral taxon 172, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21047..22843
DNA (1797bp) protein (599aa)
purH; IMP cyclohydrolase (EC:3.5.4.10)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Actinomyces sp. oral taxon 172 str. F0311 RepID=U1R0C5_9ACTO rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=1321775 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Acti rbh
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_22
Actinomyces massiliensis, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22980..23948
DNA (969bp) protein (323aa)
nisin-resistance protein n=1 Tax=Actinomyces massiliensis RepID=UPI00037502D2 rbh
Peptidase, S41 family {ECO:0000313|EMBL:EJF47512.1}; TaxID=1125718 species="Bacteria; Actinobacteria; Actinomycetales; Actinomycetaceae; Actinomyces.;" source="Actinomyces massiliensis F0489.;" rbh
nisin-resistance protein
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_23
unknown

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comp(23954..24061)
DNA (108bp) protein (36aa)

This feature has no annotations

NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_24
Kineosphaera limosa, Kineosphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24134..26428
DNA (2295bp) protein (765aa)
hypothetical protein n=1 Tax=Dehalobacter sp. FTH1 RepID=UPI0003623BB3 rbh
Periplasmic beta-glucosidase {ECO:0000313|EMBL:GAB95035.1}; TaxID=1184609 species="Bacteria; Actinobacteria; Micrococcales; Dermatophilaceae; Kineosphaera.;" source="Kineosphaera limosa NBRC 100340.;" rbh
family 3 glycosyl hydrolase
NECEvent2014_4_3_Actinomyces_59_538_scaffold_21_25
Actinomyces neuii, Actinomyces, Actinomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26438..27694
DNA (1257bp) protein (419aa)
GMP synthase [glutamine-hydrolyzing] {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008786}; EC=6.3.5.2 {ECO:0000256|HAMAP-Rule:MF_00344, ECO:0000256|SAAS:SAAS00008728};; GMP synthetase {ECO rbh
guaA; GMP synthase (EC:6.3.5.2)
GMP synthase [glutamine-hydrolyzing] n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0YUH4_9ACTO rbh
Displaying 25 items

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