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bjp_ig2158_scaffold_5617

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
bjp_ig2158_scaffold_5617_1
unknown

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1..99
-----------------
DNA (99bp)
protein (33aa)

This feature has no annotations

bjp_ig2158_scaffold_5617_2
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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83..331
-----------------
DNA (249bp)
protein (83aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI0003607C2D
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RBG_19FT_COMBO_JS1_35_14_curated
rpsP; 30S ribosomal protein S16
Probably JS1 Jill Banfield (12/9/14)
bjp_ig2158_scaffold_5617_3

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353..583
-----------------
DNA (231bp)
protein (77aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037FDB30
Marine sediment metagenome DNA, contig: S01H4_C02376 {ECO:0000313|EMBL:GAG60619.1}; Marine sediment metagenome DNA, contig: S01H4_C05370 {ECO:0000313|EMBL:GAG64988.1}; TaxID=412755 species="unclassifi
hypothetical protein
bjp_ig2158_scaffold_5617_4
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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886..1404
-----------------
DNA (519bp)
protein (173aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036CEF81 rbh
16S rRNA processing protein rimm; K02860 16S rRNA processing protein RimM Tax=RBG_19FT_COMBO_JS1_35_14_curated
Ribosome maturation factor rimM
bjp_ig2158_scaffold_5617_5

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1401..2162
-----------------
DNA (762bp)
protein (254aa)
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036A932D rbh
Marine sediment metagenome DNA, contig: S01H4_C01165 {ECO:0000313|EMBL:GAG63613.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
bjp_ig2158_scaffold_5617_6
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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2234..2578
-----------------
DNA (345bp)
protein (115aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037976F7
hypothetical protein; K02884 large subunit ribosomal protein L19 Tax=RBG_19FT_COMBO_JS1_35_14_curated
hypothetical protein
bjp_ig2158_scaffold_5617_7
RBG_19FT_COMBO_JS1_35_14_curated, Atribacteria, Bacteria

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2583..3284
-----------------
DNA (702bp)
protein (234aa)
rnhB; ribonuclease HII; K03470 ribonuclease HII [EC:3.1.26.4] Tax=RBG_19FT_COMBO_JS1_35_14_curated
ribonuclease H (EC:3.1.26.4)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00035FE0F5 rbh
bjp_ig2158_scaffold_5617_8

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3333..3713
-----------------
DNA (381bp)
protein (127aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037C636B
Marine sediment metagenome DNA, contig: S01H4_L02652 {ECO:0000313|EMBL:GAG53938.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
bjp_ig2158_scaffold_5617_9

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3731..5266
-----------------
DNA (1536bp)
protein (512aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000369CDAD rbh
Marine sediment metagenome DNA, contig: S01H4_C00079 {ECO:0000313|EMBL:GAG63636.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Mg chelatase subunit ChlI
bjp_ig2158_scaffold_5617_10

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5325..5612
-----------------
DNA (288bp)
protein (96aa)
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI000380B0A5
Marine sediment metagenome DNA, contig: S06H3_L03092 {ECO:0000313|EMBL:GAI08770.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Displaying 10 items

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