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13_1_40cm_3_scaffold_871

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
13_1_40cm_3_scaffold_871_1
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(1..189)
DNA (189bp) protein (63aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCN7_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK40996.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_871_2
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(397..810)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCN8_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_871_3
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(896..1240)
DNA (345bp) protein (115aa)
Putative [2Fe-2S] ferredoxin n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCN9_9BACT
putative [2Fe-2S] ferredoxin Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative [2Fe-2S] ferredoxin
13_1_40cm_3_scaffold_871_4
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(1260..1673)
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCP0_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_871_5
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

1864..2967
DNA (1104bp) protein (368aa)
ald; alanine dehydrogenase (EC:1.4.1.1); K00259 alanine dehydrogenase [EC:1.4.1.1] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
ald; alanine dehydrogenase (EC:1.4.1.1)
Alanine dehydrogenase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCP1_9BACT
13_1_40cm_3_scaffold_871_trna_1
unknown

Not on your lists

2993..3066
DNA (74bp)
transferRNA
13_1_40cm_3_scaffold_871_6
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

3201..3521
DNA (321bp) protein (107aa)
acyP; acylphosphatase (EC:3.6.1.7); K01512 acylphosphatase [EC:3.6.1.7] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
Acylphosphatase n=1 Tax=Anaeromyxobacter dehalogenans (strain 2CP-C) RepID=ACYP_ANADE
acylphosphatase
13_1_40cm_3_scaffold_871_7
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

3551..4516
DNA (966bp) protein (322aa)
RNA polymerase sigma factor n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCP3_9BACT rbh
rpoS; RNA polymerase, sigma S (sigma 38) factor
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_871_8
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

4668..5183
DNA (516bp) protein (172aa)
apt; adenine phosphoribosyltransferase (EC:2.4.2.7); K00759 adenine phosphoribosyltransferase [EC:2.4.2.7] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
apt; adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCP4_9BACT
13_1_40cm_3_scaffold_871_9
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

5328..5828
DNA (501bp) protein (167aa)
DnaK suppressor protein (Modular protein) n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCP5_9BACT
dksA; DnaK suppressor protein
DnaK suppressor protein (Modular protein) {ECO:0000313|EMBL:CBK41004.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvi
13_1_40cm_3_scaffold_871_10
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

5937..6620
DNA (684bp) protein (228aa)
queC; queuosine biosynthesis protein queC (EC:3.5.-.-); K06920 queuosine biosynthesis protein QueC Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
queC; queuosine biosynthesis protein queC (EC:3.5.-.-)
7-cyano-7-deazaguanine synthase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCP6_9BACT rbh
13_1_40cm_3_scaffold_871_11
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6630..6806
DNA (177bp) protein (59aa)
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_40cm_3_scaffold_871_12
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

6812..7213
DNA (402bp) protein (134aa)
Putative Cytochrome c n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCP8_9BACT
putative cytochrome c Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative cytochrome c
13_1_40cm_3_scaffold_871_13
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

7437..8282
DNA (846bp) protein (282aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCP9_9BACT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41008.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_871_14
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(8432..9340)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCQ0_9BACT
TPR-repeat-containing protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_871_15
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(9425..10330)
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8P9A5_9BACT rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK41962.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira defluvii.;"
13_1_40cm_3_scaffold_871_16
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(10334..10696)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCH9_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_871_17
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

10753..13047
DNA (2295bp) protein (765aa)
malQ; 4-alpha-glucanotransferase (EC:2.4.1.25); K00705 4-alpha-glucanotransferase [EC:2.4.1.25] Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
malQ; 4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCQ1_9BACT rbh
13_1_40cm_3_scaffold_871_18
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13109..13600
DNA (492bp) protein (164aa)
putative histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative histidine kinase (EC:2.7.13.3)
Putative Histidine kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCQ2_9BACT
13_1_40cm_3_scaffold_871_19
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

13549..14250
DNA (702bp) protein (234aa)
putative histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
putative histidine kinase (EC:2.7.13.3)
Putative Histidine kinase n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCQ2_9BACT
13_1_40cm_3_scaffold_871_20
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

14237..15637
DNA (1401bp) protein (467aa)
Sigma-54 dependent DNA-binding response regulator n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCQ3_9BACT rbh
sigma-54 dependent DNA-binding response regulator; K07714 two-component system, NtrC family, response regulator AtoC Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
sigma-54 dependent DNA-binding response regulator
13_1_40cm_3_scaffold_871_21
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(15644..16108)
DNA (465bp) protein (155aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCQ4_9BACT
hypothetical protein
Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
13_1_40cm_3_scaffold_871_22
Candidatus Nitrospira defluvii, Nitrospira, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(16130..16372)
DNA (243bp) protein (81aa)
Putative Transcriptional regulator, AsnC family n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCQ5_9BACT
putative AsnC family transcriptional regulator
Putative Transcriptional regulator, AsnC family {ECO:0000313|EMBL:CBK41014.1}; TaxID=330214 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Nitrospira.;" source="Candidatus Nitrospira d
13_1_40cm_3_scaffold_871_23
R_Nitrospirae_62_14, Nitrospirae, Bacteria

Not on your lists

comp(16528..17448)
DNA (921bp) protein (307aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrospira defluvii RepID=D8PCQ6_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Nitrospirae_62_14_curated
hypothetical protein
13_1_40cm_3_scaffold_871_24
BJP_IG2102_Desulfovibrionales_64_25, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17717..19723)
DNA (2007bp) protein (669aa)
Adenylate/guanylate cyclase id=4176853 bin=GWC2_Ignavibacteria_56_12 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Ignavibacteria_56_12 organism_group=Ignavibacteria organism_desc=Larger genome
adenylate/guanylate cyclase
Tax=BJP_IG2102_Desulfovibrionales_64_25
13_1_40cm_3_scaffold_871_25
unknown

Not on your lists

comp(19988..20242)
DNA (255bp) protein (85aa)

This feature has no annotations

13_1_40cm_3_scaffold_871_26
unknown

Not on your lists

comp(20254..20541)
DNA (288bp) protein (96aa)

This feature has no annotations

13_1_40cm_3_scaffold_871_27
GWC2_Rokubacteria_70_16_curated, Rokubacteria, Bacteria

Not on your lists

comp(20694..21155)
DNA (462bp) protein (154aa)
putative hybrid sensor histidine kinase (EC:2.7.13.3) Tax=GWC2_Rokubacteria_70_16_curated
putative hybrid sensor histidine kinase (EC:2.7.13.3)
Putative Hybrid sensor histidine kinase id=2937937 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
13_1_40cm_3_scaffold_871_28
RBG_16_Chloroflexi_63_12_curated, Chloroflexi, Bacteria

Not on your lists

comp(21308..22627)
DNA (1320bp) protein (440aa)
diguanylate cyclase with PAS/PAC and GAF sensors Tax=RBG_16_Chloroflexi_63_12_curated
Putative Histidine kinase id=4165963 bin=GWF2_Methylomirabilis_70_14 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
PAS/PAC and GAF sensor-containing diguanylate cyclase
13_1_40cm_3_scaffold_871_29
Leptospirillum ferrodiazotrophum, Leptospirillum, Nitrospirales, Nitrospira, Nitrospirae, Bacteria

Not on your lists

comp(22798..23625)
DNA (828bp) protein (276aa)
Putative uncharacterized protein n=1 Tax=Leptospirillum ferrodiazotrophum RepID=C6I110_9BACT
Putative uncharacterized protein {ECO:0000313|EMBL:EES51438.1}; TaxID=412449 species="Bacteria; Nitrospirae; Nitrospirales; Nitrospiraceae; Leptospirillum.;" source="Leptospirillum ferrodiazotrophum.;
hypothetical protein
Displaying items 1-30 of 37 in total

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