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SCNpilot_BF_INOC_scaffold_1280_56

Organism: SCNpilot_BF_INOC_Burkholderiales_67_9

near complete RP 53 / 55 MC: 2 BSCG 50 / 51 ASCG 13 / 38
Location: comp(47521..47832)

Top 3 Functional Annotations

Value Algorithm Source
30S ribosomal protein S10 n=1 Tax=Ramlibacter tataouinensis (strain ATCC BAA-407 / DSM 14655 / LMG 21543 / TTB310) RepID=F5Y585_RAMTT similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 102.0
  • Bit_score: 198
  • Evalue 2.50e-48
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temper similarity UNIPROT
DB: UniProtKB
  • Identity: 97.1
  • Coverage: 103.0
  • Bit_score: 199
  • Evalue 2.10e-48
rpsJ; 30S ribosomal protein S10 similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 102.0
  • Bit_score: 198
  • Evalue 7.10e-49

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Taxonomy

Acidovorax temperans → Acidovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 312
ATGGCACAGCAAAAAATCCGCATCCGCCTGAAGGCCTTCGACTACAAGCTGATCGACCAGTCCGCGGCCGAGATCGTTGACACCGCCAAGCGCACCGGCGCCGTGGTCAAGGGCCCCGTGCCCCTGCCCACGCGCATGAAGCGCTTCGACATCCTGCGCTCGCCGCACGTCAACAAGTCAAGCCGCGACCAGCTGGAGATCCGCACCCACCAGCGCCTGATGGACATCGTCGACCCCACCGACAAGACCGTGGACGCGCTGATGAAGCTGGACCTGCCGGCCGGCGTCGACGTCGAGATCAAGCTGCAGTAA
PROTEIN sequence
Length: 104
MAQQKIRIRLKAFDYKLIDQSAAEIVDTAKRTGAVVKGPVPLPTRMKRFDILRSPHVNKSSRDQLEIRTHQRLMDIVDPTDKTVDALMKLDLPAGVDVEIKLQ*