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SCNpilot_BF_INOC_scaffold_19088_2

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(543..1340)

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0E9Q4_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 42.5
  • Coverage: 273.0
  • Bit_score: 217
  • Evalue 1.80e-53
ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EEG31819.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source= similarity UNIPROT
DB: UniProtKB
  • Identity: 42.5
  • Coverage: 273.0
  • Bit_score: 217
  • Evalue 2.50e-53
family 3 extracellular solute-binding protein similarity KEGG
DB: KEGG
  • Identity: 39.8
  • Coverage: 264.0
  • Bit_score: 193
  • Evalue 7.70e-47

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Taxonomy

[Clostridium] methylpentosum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 798
ATGAAAAAAAATATTTTAGCACTATTAACTGTAATTTCAATACTTACTATATTCGTAGGATGCAGTTCAAACACAAGCAAAACACAAGGCAATGAAAACAGCAACTCAAAAAGCGGCACTTTAACTATGTATACTAATGCAGAATTTGCGCCCTTCGAATACTTTAAAGGCGAGAAAGTAGTGGGTGTTGATGCTGACATTGCCGAAAGAATTGCCGCAGCCGCCGGTAAAGAATTAAAGATACAACATACCGATTTTGACAGCTTAGTTCCGTCACTTGTTGCAGGAAAGGCAGATTTTGTTGCCGCAGCTATGACGATTACACCCGAAAGAATGGAAGAAGTAGACTTCTCTATTCCCTATGTGGAATCTATTCAGCATATTATTTCTTTGAACGAATCAAATTACACAACAATGGACGATTTAAAGGGCAAAAAAATAGGTGTTCAATTAGGTACTACAGGTGACCTCATGGTATCAGATGCAATAAATCTTGATGACGGAGCCCTGAAGGGTTCAGGCTCGGAAGTAAAGCCATATTCAAGCCCATTGGAAGCAGCTCAGGACCTCTTGACAGGAAGAATAGATGCTGTGGTTGTGGATAAGCTCACTGCTGAAGAAATATCCAAAAACAACAGCGATAAGCTTACATCTGTAAAATTCGGCGAGATAAGCGAATCCTACGGAATTGCAGTAGCAAAAGGAAATAAAGAGCTGCTTGAAATCATAAACAGCACCCTTCAAAAATTGCTTGATGAAGGTAAGATCGAAGAATTAATTGAAAAACATTCAAATTAA
PROTEIN sequence
Length: 266
MKKNILALLTVISILTIFVGCSSNTSKTQGNENSNSKSGTLTMYTNAEFAPFEYFKGEKVVGVDADIAERIAAAAGKELKIQHTDFDSLVPSLVAGKADFVAAAMTITPERMEEVDFSIPYVESIQHIISLNESNYTTMDDLKGKKIGVQLGTTGDLMVSDAINLDDGALKGSGSEVKPYSSPLEAAQDLLTGRIDAVVVDKLTAEEISKNNSDKLTSVKFGEISESYGIAVAKGNKELLEIINSTLQKLLDEGKIEELIEKHSN*