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SCNpilot_BF_INOC_scaffold_4966_3

Organism: SCNpilot_BF_INOC_Clostridium_42_5_partial

partial RP 46 / 55 MC: 1 BSCG 40 / 51 MC: 2 ASCG 13 / 38 MC: 3
Location: comp(1294..2043)

Top 3 Functional Annotations

Value Algorithm Source
PHP domain protein {ECO:0000313|EMBL:EEG31183.1}; EC=3.1.3.- {ECO:0000313|EMBL:EEG31183.1};; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.; similarity UNIPROT
DB: UniProtKB
  • Identity: 38.3
  • Coverage: 230.0
  • Bit_score: 161
  • Evalue 2.00e-36
PHP domain protein n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EBA7_9CLOT similarity UNIREF
DB: UNIREF100
  • Identity: 38.3
  • Coverage: 230.0
  • Bit_score: 161
  • Evalue 1.40e-36
PHP domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 36.9
  • Coverage: 241.0
  • Bit_score: 151
  • Evalue 3.10e-34

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Taxonomy

[Clostridium] methylpentosum → Ruminiclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 750
ATGGATATAATTACTCGTCCTATTGATATAGTCGATACTCATACCCACATACTGCCTTCGATTGACGACGGTTCTTCCAGTGTGACCGAGTCTGTCTCTTTAATCAAAACATTAATACATCAAGGGGTGGATACGATAGTACTCACCCCTCATTACTATTTTAGTGAAATAAGCACCGATTCGTTTTTGGAAAACAGAAAACTGGCTTTTTCCCAGTTACTCGACGAGCCTGAAATTCATAATATCAACCTTATTCTGGGAGCTGAAGTTTATTTTTCTATCTACTTGCATAGTATTGAAAGGCTGTCCGAGCTGTGTATCGGGGGTACGAAATATCTGCTGCTTGAACTGCCCTTTATGAAAAAGATTGACAGCAGAACCATCTCTTATATTGAAAAAATCATATATAATAATAACCTCATTCCTGTGATTGCCCATGCTGAACGCTATCTGTCTATTGGTAAAAAAAATATTGAGGCAATTCAGCTGTTGGATGAAATGGGCTGTATGATACAGCTGAATGCTGAGTCATTTTTAATCAAACCACTGCAAAAGCATTGCTTAAAAATAATTGAGACAGGTGCTGTTGTGGCACTCGGCAGCGACAGCCATAATATGAAGGACAGAAAACCGGAAATGAACCGTGCCATTCAATTTTTATCAGACACTTATGGCAATGATGTGACACGTGGTGTTATCAACAACGCAAAGTTGATTTTATCGGGAAAGGATGCTTTTTTAAATGCTTGA
PROTEIN sequence
Length: 250
MDIITRPIDIVDTHTHILPSIDDGSSSVTESVSLIKTLIHQGVDTIVLTPHYYFSEISTDSFLENRKLAFSQLLDEPEIHNINLILGAEVYFSIYLHSIERLSELCIGGTKYLLLELPFMKKIDSRTISYIEKIIYNNNLIPVIAHAERYLSIGKKNIEAIQLLDEMGCMIQLNAESFLIKPLQKHCLKIIETGAVVALGSDSHNMKDRKPEMNRAIQFLSDTYGNDVTRGVINNAKLILSGKDAFLNA*