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ACD24_279_8

Organism: ACD24

partial RP 42 / 55 MC: 13 BSCG 35 / 51 MC: 9 ASCG 0 / 38
Location: 4998..5855

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG
  • Identity: 54.3
  • Coverage: 289.0
  • Bit_score: 327
  • Evalue 2.80e-87
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=19 to=286 evalue=3.0e-76 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 3.00e-76
no description (db=HMMSmart db_id=SM00662 from=19 to=225 evalue=5.0e-55 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMSmart
  • Identity: null
  • Coverage: null
  • Bit_score: null
  • Evalue 5.00e-55

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Taxonomy

uncultured bacterium → Bacteria

Sequences

DNA sequence
Length: 858
ATGTTATTAAACCCCTCAGAGTTAAAAATCACCATTATATCCGAAGATAAAAATAAAGGTGTGTTTTCAATTGAACCGTTACCTACAAATTTTGGTCATACTATCGGAAATTCTTTAAAAAGAATTCTCCTGACTTCTTTAAAAGGCGCTGTTATAACACAAGTTAAAGTATCAGGAGCTGATCACCAATTTTCTACTATTCCCGGAGTAAAAGAAGATATCGTTGAAGTCACATTAAACCTTAAAAGAATAAGATTTAAGGTTTACGGAGAAAATCCGGTTGTATTGAATATAAACAAAAAAGGACCAGGTGAAGTAACTGCTGCCGATATTGAGCTGAACTCGGAAGTGGAAGTTTTGAATAAAAATCAGCATATTGCTACTTTGGCCGATAAAAATACCAATTTAAAAATGGAATTGATTATCGAGTCAGGAACCGGATACTCTCCTATGGAAGAAAGACAATCTTCAAAAATAGGTGTAATCGTTTTAGACGCCGACTTCTCTCCGGTAAAAAGCGTATCGTATACTGTAGAACCTGCAAGGTTTGGAAAAGACATCAATCTCGATAATTTAATTTTATCTGTCGAAACAGATGGCAGTATAAAGCCATCCGAAGCCGTTAAAAAGTCGGCAGATCTGCTTAAGGAATTCGCCATCAAAATATATGAATGGGTGATGCCTGTACAAGAACAGGAAGCTGAAAACAGCAGTATGGGTAATGAAAAAAGAGTTATGACAGAAAAAATATCAGTAGATGAATTACCGCTTCCAACCAGAACTATAAACGCCTTAAAAAAACAAGGGATAGAAACACTCGACCAGCTGGCTGAAAAAAGCGATGAGGAATTAGCTGAT
PROTEIN sequence
Length: 286
MLLNPSELKITIISEDKNKGVFSIEPLPTNFGHTIGNSLKRILLTSLKGAVITQVKVSGADHQFSTIPGVKEDIVEVTLNLKRIRFKVYGENPVVLNINKKGPGEVTAADIELNSEVEVLNKNQHIATLADKNTNLKMELIIESGTGYSPMEERQSSKIGVIVLDADFSPVKSVSYTVEPARFGKDINLDNLILSVETDGSIKPSEAVKKSADLLKEFAIKIYEWVMPVQEQEAENSSMGNEKRVMTEKISVDELPLPTRTINALKKQGIETLDQLAEKSDEELAD