ggKbase home page
Advanced Search
Search Help

ACD24_279_8 Annotations

Value Algorithm Source Identity Coverage Bit score Evalue Cross references
DNA-directed RNA polymerase subunit alpha similarity KEGG
DB: KEGG 		54.3 289.0 327 2.80e-87 wwe:P147_WWE3C01G0041
rpoA: DNA-directed RNA polymerase, alpha sub (db=HMMTigr db_id=TIGR02027 from=19 to=286 evalue=3.0e-76 interpro_id=IPR011773 interpro_description=DNA-directed RNA polymerase, alpha subunit GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription, DNA-dependent (GO:0006351)) iprscan interpro
DB: HMMTigr 		null null null 3.00e-76 wwe:P147_WWE3C01G0041
no description (db=HMMSmart db_id=SM00662 from=19 to=225 evalue=5.0e-55 interpro_id=IPR011263 interpro_description=DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMSmart 		null null null 5.00e-55 wwe:P147_WWE3C01G0041
Insert subdomain of RNA polymerase alpha subunit (db=superfamily db_id=SSF56553 from=49 to=169 evalue=1.4e-41 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: superfamily 		null null null 1.40e-41 wwe:P147_WWE3C01G0041
no description (db=Gene3D db_id=G3DSA:2.170.120.12 from=49 to=168 evalue=5.9e-37 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: Gene3D 		null null null 5.90e-37 wwe:P147_WWE3C01G0041
RBP11-like subunits of RNA polymerase (db=superfamily db_id=SSF55257 from=5 to=226 evalue=1.3e-26 interpro_id=IPR009025 interpro_description=DNA-directed RNA polymerase, RBP11-like GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: superfamily 		null null null 1.30e-26 wwe:P147_WWE3C01G0041
RNA_pol_A_bac (db=HMMPfam db_id=PF01000 from=61 to=152 evalue=6.2e-20 interpro_id=IPR011262 interpro_description=DNA-directed RNA polymerase, insert domain GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 6.20e-20 wwe:P147_WWE3C01G0041
RNA_pol_L (db=HMMPfam db_id=PF01193 from=24 to=219 evalue=4.8e-18 interpro_id=IPR011261 interpro_description=DNA-directed RNA polymerase, dimerisation GO=Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350), Molecular Function: protein dimerization activity (GO:0046983)) iprscan interpro
DB: HMMPfam 		null null null 4.80e-18 wwe:P147_WWE3C01G0041
RNA_pol_A_CTD (db=HMMPfam db_id=PF03118 from=247 to=285 evalue=4.6e-09 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: HMMPfam 		null null null 4.60e-09 wwe:P147_WWE3C01G0041
C-terminal domain of RNA polymerase alpha subunit (db=superfamily db_id=SSF47789 from=244 to=286 evalue=1.9e-06 interpro_id=IPR011260 interpro_description=RNA polymerase, alpha subunit, C-terminal GO=Molecular Function: DNA binding (GO:0003677), Molecular Function: DNA-directed RNA polymerase activity (GO:0003899), Biological Process: transcription (GO:0006350)) iprscan interpro
DB: superfamily 		null null null 1.90e-06 wwe:P147_WWE3C01G0041
Uncharacterized protein {ECO:0000313|EMBL:EKD96213.1}; Flags: Fragment;; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" UNIPROT
DB: UniProtKB 		100.0 286.0 552 4.60e-154 K2DRM6_9BACT
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6); K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] alias=ACD24_20116.5816.18G0008,ACD24_20116.5816.18_8,ACD24_C00279G00008 id=29048 tax=ACD24 species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria organism_group=WWE3 organism_desc=WWE3 similarity UNIREF
DB: UNIREF90 		100.0 null 551 1.30e-154 wwe:P147_WWE3C01G0041