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scnpilot_cont_500_p_scaffold_18

Search features with annotation key words

Displaying items 121-150 of 293 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_18_121
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

114700..115128
DNA (429bp) protein (143aa)
lactoylglutathione lyase (EC:4.4.1.5)
glyoxalase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6DEE5
Glyoxalase/bleomycin resistance protein/dioxygenase {ECO:0000313|EMBL:EGD59375.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingo
scnpilot_cont_500_p_scaffold_18_122
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(115151..116206)
DNA (1056bp) protein (352aa)
Na(+)/H(+) antiporter NhaA 2 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=NHAA2_NOVAD rbh
Na+/H+ antiporter NhaA
Na(+)/H(+) antiporter NhaA 2 {ECO:0000255|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA 2 {ECO:0000255|HAMAP-Rule:MF_01844}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria;
scnpilot_cont_500_p_scaffold_18_123
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116442..117890
DNA (1449bp) protein (483aa)
Bacteriophage N4 adsorption protein B n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IMV7_9SPHN rbh
hypothetical protein
Bacteriophage N4 adsorption protein B {ECO:0000313|EMBL:CCA92759.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
scnpilot_cont_500_p_scaffold_18_124
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

117890..119179
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GEI4_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAO53848.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_18_125
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119249..120160
DNA (912bp) protein (304aa)
permease n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6260E rbh
Scaffold11, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31447.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
hypothetical protein
scnpilot_cont_500_p_scaffold_18_126
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120157..120936
DNA (780bp) protein (260aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6C9BE rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27077.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
scnpilot_cont_500_p_scaffold_18_127
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

121028..122725
DNA (1698bp) protein (566aa)
Putative ATPase n=1 Tax=Novosphingobium sp. AP12 RepID=J2FUN5_9SPHN rbh
hypothetical protein; K06915 Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
hypothetical protein
scnpilot_cont_500_p_scaffold_18_128
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122737..124176)
DNA (1440bp) protein (480aa)
MATE efflux family protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C450_9SPHN rbh
MATE efflux family protein {ECO:0000313|EMBL:EIZ78602.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
MATE efflux family protein
scnpilot_cont_500_p_scaffold_18_129
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124173..124916)
DNA (744bp) protein (248aa)
7-carboxy-7-deazaguanine synthase {ECO:0000256|HAMAP-Rule:MF_00917}; Short=CDG synthase {ECO:0000256|HAMAP-Rule:MF_00917};; EC=4.3.99.3 {ECO:0000256|HAMAP-Rule:MF_00917};; Queuosine biosynthesis prote
7-carboxy-7-deazaguanine synthase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A3S9_9SPHN rbh
pyrroloquinoline quinone biosynthesis protein PqqE
scnpilot_cont_500_p_scaffold_18_130
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(124927..127626)
DNA (2700bp) protein (900aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4E1_NOVAD rbh
valyl-tRNA synthetase
scnpilot_cont_500_p_scaffold_18_131
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

127735..128874
DNA (1140bp) protein (380aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4E2_NOVAD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD27281.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_18_132
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

128871..129704
DNA (834bp) protein (278aa)
iron ABC transporter ATP-binding protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B40C02 rbh
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHK93614.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
putative ABC transport system ATP-binding protein
scnpilot_cont_500_p_scaffold_18_133
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

129712..130650
DNA (939bp) protein (313aa)
Putative ABC transporter periplasmic protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YLW4_9SPHN rbh
Putative ABC transporter periplasmic protein {ECO:0000313|EMBL:GAD49407.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;
mammalian cell entry protein
scnpilot_cont_500_p_scaffold_18_134
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

130647..131225
DNA (579bp) protein (193aa)
Putative ABC transporter auxiliary protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A3T4_9SPHN
Putative ABC transporter auxiliary protein {ECO:0000313|EMBL:GAD49408.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_18_135
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(131475..132170)
DNA (696bp) protein (232aa)
ATP12 ATPase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4E6_NOVAD
ATP12 ATPase {ECO:0000313|EMBL:KHS48725.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium subterra
ATP12 ATPase
scnpilot_cont_500_p_scaffold_18_136
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132170..132391)
DNA (222bp) protein (74aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
scnpilot_cont_500_p_scaffold_18_137
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132388..133053)
DNA (666bp) protein (222aa)
HAD-superfamily hydrolase, subfamily IA, variant 1 n=1 Tax=Erythrobacter sp. NAP1 RepID=A3WAF5_9SPHN
Haloacid dehalogenase {ECO:0000313|EMBL:KEO88061.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter s
HAD family hydrolase
scnpilot_cont_500_p_scaffold_18_138
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133050..133649)
DNA (600bp) protein (200aa)
Negative transcriptional regulator n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4E9_NOVAD
Negative transcriptional regulator {ECO:0000313|EMBL:KHS48728.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="No
negative transcriptional regulator
scnpilot_cont_500_p_scaffold_18_139
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133649..134968)
DNA (1320bp) protein (440aa)
Pseudouridine synthase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WEI4_9SPHN rbh
Ribosomal large subunit pseudouridine synthase C {ECO:0000313|EMBL:EIZ78613.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobiu
pseudouridine synthase
scnpilot_cont_500_p_scaffold_18_140
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135284..135490
DNA (207bp) protein (69aa)
30S ribosomal protein S21 n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBM0_9SPHN
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; No
rpsU; 30S ribosomal protein S21
scnpilot_cont_500_p_scaffold_18_141
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135718..136251
DNA (534bp) protein (178aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HKE7_9SPHN
peptidylprolyl isomerase, FKBP-type
scnpilot_cont_500_p_scaffold_18_142
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136313..136678
DNA (366bp) protein (122aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6 6.3.5.7)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WEJ0_9SPHN
scnpilot_cont_500_p_scaffold_18_143
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

136678..138159
DNA (1482bp) protein (494aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=163064
gatA; aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=GATA_NOVAD rbh
scnpilot_cont_500_p_scaffold_18_144
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138337..139842
DNA (1506bp) protein (502aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121, ECO:0000256|SAAS:SAAS00247567}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.-
gatB; aspartyl/glutamyl-tRNA amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B n=1 Tax=Sphingomonas sp. LH128 RepID=J8VRI0_9SPHN rbh
scnpilot_cont_500_p_scaffold_18_145
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(140095..142947)
DNA (2853bp) protein (951aa)
Peptidase M16 domain-containing protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E8J2_9SPHN rbh
Peptidase M16 {ECO:0000313|EMBL:KHK92988.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malay
peptidase M16 rbh
scnpilot_cont_500_p_scaffold_18_146
unknown

Not on your lists

comp(143036..143683)
DNA (648bp) protein (216aa)
membrane protein n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CDCA4
scnpilot_cont_500_p_scaffold_18_147
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143874..145640
DNA (1767bp) protein (589aa)
Peptidase M28 n=1 Tax=Sphingobium ummariense RL-3 RepID=T0IZ30_9SPHN rbh
Peptidase M28 {ECO:0000313|EMBL:EQB31001.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium ummariense RL
peptidase M28
scnpilot_cont_500_p_scaffold_18_148
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145756..148335
DNA (2580bp) protein (860aa)
AAA ATPase, central region n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4G3_NOVAD rbh
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
ATPase AAA
scnpilot_cont_500_p_scaffold_18_149
bacterium YEK0313, Bacteria

Not on your lists

comp(148374..149000)
DNA (627bp) protein (209aa)
Glutathione S-transferase n=1 Tax=Azospirillum lipoferum (strain 4B) RepID=G7ZHA9_AZOL4
Putative GST-like protein YibF {ECO:0000313|EMBL:CEJ15533.1}; TaxID=1522316 species="Bacteria.;" source="bacterium YEK0313.;"
gst3; glutathione S-transferase
scnpilot_cont_500_p_scaffold_18_150
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

149122..149988
DNA (867bp) protein (289aa)
S-methyl-5'-thioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; EC=2.4.2.28 {ECO:0000256|HAMAP-Rule:MF_01963};; 5'-methylthioadenosine phosphorylase {ECO:0000256|HAMAP-Rule:MF_01963}; TaxID
5'-methylthioadenosine phosphorylase (EC:2.4.2.28)
S-methyl-5'-thioadenosine phosphorylase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0INV3_9SPHN rbh
Displaying items 121-150 of 293 in total

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