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scnpilot_cont_500_p_scaffold_18

Search features with annotation key words

Displaying items 151-180 of 293 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_18_151
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150043..151431)
DNA (1389bp) protein (463aa)
Aminomethyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5N3_NOVAD rbh
Similar to vanillate/3-O-methylgallate O-demethylase {ECO:0000313|EMBL:GAO55517.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphin
glycine cleavage T protein (aminomethyl transferase)
scnpilot_cont_500_p_scaffold_18_152
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(151460..152167)
DNA (708bp) protein (236aa)
Putative hydrolase n=2 Tax=Sphingomonadaceae RepID=G2IJ06_9SPHN
putative hydrolase
Putative uncharacterized protein {ECO:0000313|EMBL:BAC79256.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingo
scnpilot_cont_500_p_scaffold_18_153
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

152339..153214
DNA (876bp) protein (292aa)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadale
Methylenetetrahydrofolate reductase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MQ25_9SPHN rbh
methylenetetrahydrofolate reductase
scnpilot_cont_500_p_scaffold_18_154
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

153279..154157
DNA (879bp) protein (293aa)
Formyltetrahydrofolate deformylase {ECO:0000256|HAMAP-Rule:MF_01927}; EC=3.5.1.10 {ECO:0000256|HAMAP-Rule:MF_01927};; Formyl-FH(4) hydrolase {ECO:0000256|HAMAP-Rule:MF_01927}; TaxID=1301087 species="B
purU; formyltetrahydrofolate deformylase (EC:3.5.1.10)
Formyltetrahydrofolate deformylase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MNN1_9SPHN rbh
scnpilot_cont_500_p_scaffold_18_155
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154175..154567
DNA (393bp) protein (131aa)
Dihydroneopterin aldolase n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MT40_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:KFL48714.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
dihydroneopterin aldolase
scnpilot_cont_500_p_scaffold_18_156
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(154787..155653)
DNA (867bp) protein (289aa)
LysR family transcriptional regulator n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B70C41 rbh
Transcriptional regulator {ECO:0000313|EMBL:GAO54068.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_18_157
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

155931..156635
DNA (705bp) protein (235aa)
3-oxoacid CoA-transferase subunit A (EC:2.8.3.5)
3-oxoacid CoA-transferase subunit A n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WCZ8_9SPHN rbh
3-oxoacid CoA-transferase subunit A {ECO:0000313|EMBL:EIZ78068.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
scnpilot_cont_500_p_scaffold_18_158
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156641..157276
DNA (636bp) protein (212aa)
Succinyl-CoA:3-ketoacid-coenzyme A transferase subunit B {ECO:0000313|EMBL:GAO54070.1}; EC=2.8.3.5 {ECO:0000313|EMBL:GAO54070.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria;
scoB; 3-oxoacid CoA-transferase subunit B (EC:2.8.3.5)
3-oxoacid CoA-transferase subunit B n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHD2_9SPHN rbh
scnpilot_cont_500_p_scaffold_18_159
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157335..158936)
DNA (1602bp) protein (534aa)
DSBA oxidoreductase n=1 Tax=Sphingomonas wittichii RepID=UPI00030C49E5 rbh
EmrB/QacA family drug resistance transporter
Drug resistance transporter, EmrB/QacA subfamily {ECO:0000313|EMBL:ABQ69575.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;
scnpilot_cont_500_p_scaffold_18_160
Sphingomonas sp. RIT328, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(158948..160144)
DNA (1197bp) protein (399aa)
secretion protein HlyD n=1 Tax=Sphingomonas melonis RepID=UPI0003820634 rbh
HlyD secretion family protein {ECO:0000313|EMBL:EZP51661.1}; TaxID=1470591 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingom
secretion protein HlyD family protein
scnpilot_cont_500_p_scaffold_18_161
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(160150..161625)
DNA (1476bp) protein (492aa)
RND efflux system, outer membrane lipoprotein, NodT family n=2 Tax=Sphingomonas wittichii RepID=A5VBB1_SPHWW rbh
RND efflux system outer membrane lipoprotein
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ABQ69577.1}; Flags: Precursor;; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphi
scnpilot_cont_500_p_scaffold_18_162
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(161801..162730)
DNA (930bp) protein (310aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B35FD6 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB16365.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_18_163
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(162798..163676)
DNA (879bp) protein (293aa)
2-pyrone-4,6-dicarboxylate hydrolase n=1 Tax=Sphingobium xenophagum RepID=UPI00031AFF9D rbh
2-pyrone-4,6-dicarboxylate hydrolase
2-pyrone-4,6-dicarbaxylate hydrolase {ECO:0000313|EMBL:EHJ59300.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
scnpilot_cont_500_p_scaffold_18_164
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(163690..164751)
DNA (1062bp) protein (354aa)
Methylitaconate delta2-delta3-isomerase n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9CCM9_9SPHN rbh
Methylitaconate delta2-delta3-isomerase {ECO:0000313|EMBL:EIZ81210.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour
4-oxalomesaconate tautomerase
scnpilot_cont_500_p_scaffold_18_165
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(165033..165707)
DNA (675bp) protein (225aa)
4-carboxy-4-hydroxy-2-oxoadipate aldolase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4H0_NOVAD rbh
4-hydroxy-4-methyl-2-oxoadipate aldolase {ECO:0000313|EMBL:KHS44427.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour
hypothetical protein
scnpilot_cont_500_p_scaffold_18_166
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165822..166985
DNA (1164bp) protein (388aa)
Transcriptional regulator, LysR family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4H1_NOVAD rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:KHS44426.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_18_167
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167096..167935
DNA (840bp) protein (280aa)
6-phosphogluconate dehydrogenase, NAD-binding protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4H2_NOVAD rbh
3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases {ECO:0000313|EMBL:GAO55095.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sp
6-phosphogluconate dehydrogenase
scnpilot_cont_500_p_scaffold_18_168
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

167942..168967
DNA (1026bp) protein (342aa)
4-oxalomesaconate hydratase {ECO:0000313|EMBL:ABD27250.1}; EC=4.2.1.83 {ECO:0000313|EMBL:ABD27250.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
4-oxalomesaconate hydratase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4H3_NOVAD rbh
amidohydrolase
scnpilot_cont_500_p_scaffold_18_169
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169023..169469
DNA (447bp) protein (149aa)
Protocatechuate 4,5-dioxygenase subunit alpha {ECO:0000313|EMBL:KHS44423.1}; EC=1.13.11.8 {ECO:0000313|EMBL:KHS44423.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomon
protocatechuate 4,5-dioxygenase subunit alpha (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase alpha subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4H4_NOVAD
scnpilot_cont_500_p_scaffold_18_170
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

169481..170323
DNA (843bp) protein (281aa)
protocatechuate 4,5-dioxygenase subunit beta (EC:1.13.11.8)
Protocatechuate 4,5-dioxygenase beta subunit {ECO:0000313|EMBL:ABD27248.1}; EC=1.13.11.8 {ECO:0000313|EMBL:ABD27248.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomon
Protocatechuate 4,5-dioxygenase beta subunit n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4H5_NOVAD rbh
scnpilot_cont_500_p_scaffold_18_171
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

170383..171333
DNA (951bp) protein (317aa)
4-carboxy-2-hydroxymuconate semialdehyde dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G4H6_NOVAD rbh
Oxidoreductase-like protein {ECO:0000313|EMBL:KHS44421.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
oxidoreductase-like protein
scnpilot_cont_500_p_scaffold_18_172
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

171598..172590
DNA (993bp) protein (331aa)
aldo/keto reductase n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003AB29E2 rbh
Aldo/keto reductase {ECO:0000313|EMBL:KHS43437.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium s
aldo/keto reductase
scnpilot_cont_500_p_scaffold_18_173
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(172628..173056)
DNA (429bp) protein (143aa)
Fur family transcriptional regulator, ferric uptake regulator n=1 Tax=Sphingomonas sp. LH128 RepID=J8VWA1_9SPHN
Fur family transcriptional regulator {ECO:0000313|EMBL:KHK92963.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
Fur family transcriptional regulator
scnpilot_cont_500_p_scaffold_18_174
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173172..173615)
DNA (444bp) protein (148aa)
MucR family transcriptional regulator n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IN05_9SPHN
MucR family transcriptional regulator
MucR family transcriptional regulator {ECO:0000313|EMBL:CCA92807.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
scnpilot_cont_500_p_scaffold_18_175
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(173788..174264)
DNA (477bp) protein (159aa)
Acetyltransferase n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IN06_9SPHN
acetyltransferase
Acetyltransferase {ECO:0000313|EMBL:CCA92808.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp
scnpilot_cont_500_p_scaffold_18_176
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174286..174978)
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0GTC3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB07201.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
metal-dependent protease
scnpilot_cont_500_p_scaffold_18_177
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(174975..175550)
DNA (576bp) protein (192aa)
Nitrogen-fixing NifU-like protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G9P0_NOVAD rbh
nitrogen-fixing NifU-like
Iron transporter {ECO:0000313|EMBL:EQB07202.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium li
scnpilot_cont_500_p_scaffold_18_178
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

175688..178573
DNA (2886bp) protein (962aa)
Zinc protease n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E8G1_9SPHN rbh
Peptidase M16 {ECO:0000313|EMBL:KHK92958.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malay
peptidase M16
scnpilot_cont_500_p_scaffold_18_179
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

178819..180189
DNA (1371bp) protein (457aa)
3-deoxy-7-phosphoheptulonate synthase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E8G0_9SPHN rbh
phospho-2-dehydro-3-deoxyheptonate aldolase
3-deoxy-7-phosphoheptulonate synthase {ECO:0000313|EMBL:EHJ62500.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
scnpilot_cont_500_p_scaffold_18_180
unknown

Not on your lists

180268..180792
DNA (525bp) protein (175aa)

This feature has no annotations

Displaying items 151-180 of 293 in total

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