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scnpilot_cont_500_p_scaffold_18

Search features with annotation key words

Displaying items 181-210 of 293 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_18_181
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

180789..181421
DNA (633bp) protein (211aa)
LysE type translocator family protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C695_9SPHN
LysE type translocator family protein {ECO:0000313|EMBL:EIZ79332.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
lysine exporter protein LysE/YggA
scnpilot_cont_500_p_scaffold_18_182
Sphingomonas sp. WHSC-8, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(181657..182634)
DNA (978bp) protein (326aa)
quinone oxidoreductase n=1 Tax=Sphingomonas sp. PAMC 26605 RepID=UPI00026CC57D
quinone oxidoreductase
Quinone oxidoreductase {ECO:0000313|EMBL:AJP73211.1}; TaxID=1609977 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
scnpilot_cont_500_p_scaffold_18_183
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(182642..183259)
DNA (618bp) protein (206aa)
chromosome partitioning protein ParB n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5C1BC
Putative ParB-like nuclease {ECO:0000313|EMBL:EZP82892.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
hypothetical protein
scnpilot_cont_500_p_scaffold_18_184
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(183279..184907)
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Sphingomonas sp. LH128 RepID=J8SMY0_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EJU14169.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
sulfate transporter
scnpilot_cont_500_p_scaffold_18_185
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(184941..185825)
DNA (885bp) protein (295aa)
Transglutaminase-like enzyme n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z5J3_9SPHN rbh
Transglutaminase-like enzyme {ECO:0000313|EMBL:EGD60103.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
transglutaminase
scnpilot_cont_500_p_scaffold_18_186
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(185833..188283)
DNA (2451bp) protein (817aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B56459 rbh
Protein containing domains DUF404, DUF407, DUF403 {ECO:0000313|EMBL:GAO54100.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_18_187
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(188318..191677)
DNA (3360bp) protein (1120aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z5J5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD60105.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
IMP dehydrogenase
scnpilot_cont_500_p_scaffold_18_188
Sinorhizobium fredii, Sinorhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

191814..192884
DNA (1071bp) protein (357aa)
alr; hypothetical protein (EC:5.1.1.1)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201, ECO:0000256|SAAS:SAAS00021659};; TaxID=1117943 species="Bacteria; Proteo
alanine racemase n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A45C rbh
scnpilot_cont_500_p_scaffold_18_189
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(192926..195394)
DNA (2469bp) protein (823aa)
TonB-dependent receptor n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9CD83_9SPHN rbh
TonB-dependent receptor {ECO:0000313|EMBL:EIZ81370.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
TonB-dependent receptor-like protein
scnpilot_cont_500_p_scaffold_18_190
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

195598..196737
DNA (1140bp) protein (380aa)
Putative uncharacterized protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z7A9_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD59528.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
putative permease
scnpilot_cont_500_p_scaffold_18_191
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(196728..199082)
DNA (2355bp) protein (785aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Sphingobium sp. AP49 RepID=J2D4E7_9SPHN rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EJK84544.1}; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_cont_500_p_scaffold_18_192
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(199220..200098)
DNA (879bp) protein (293aa)
Citrate lyase beta subunit n=1 Tax=Novosphingobium sp. AP12 RepID=J2GSH4_9SPHN rbh
Citrate lyase subunit beta {ECO:0000313|EMBL:EZP84824.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
malyl-CoA thiolesterase
scnpilot_cont_500_p_scaffold_18_193
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(200236..200676)
DNA (441bp) protein (147aa)
CheW protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z7Q9_9SPHN
Positive regulator of cheA protein activity {ECO:0000313|EMBL:GAO53020.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;"
purine-binding chemotaxis protein CheW
scnpilot_cont_500_p_scaffold_18_194
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(200768..201262)
DNA (495bp) protein (165aa)
Flavin reductase-like, FMN-binding n=1 Tax=Sphingobium japonicum BiD32 RepID=N1MX76_9SPHN
Monooxygenase {ECO:0000313|EMBL:KHK91832.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malay
flavin reductase-like, FMN-binding
scnpilot_cont_500_p_scaffold_18_195
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(201383..203680)
DNA (2298bp) protein (766aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Nov
ATP-dependent DNA helicase, Rep family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8T6_NOVAD rbh
ATP-dependent DNA helicase Rep
scnpilot_cont_500_p_scaffold_18_196
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

203787..205064
DNA (1278bp) protein (426aa)
MFS transporter n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B2EC03 rbh
Permeases of the major facilitator superfamily {ECO:0000313|EMBL:GAO56232.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium
general substrate transporter
scnpilot_cont_500_p_scaffold_18_197
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205277..205837)
DNA (561bp) protein (187aa)
N6-adenine-specific methylase n=1 Tax=Sphingomonas sp. LH128 RepID=J8S906_9SPHN
N6-adenine-specific methylase {ECO:0000313|EMBL:EZP83877.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
methyltransferase
scnpilot_cont_500_p_scaffold_18_198
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(205834..206889)
DNA (1056bp) protein (352aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomona
Pseudouridine synthase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z851_9SPHN rbh
pseudouridine synthase
scnpilot_cont_500_p_scaffold_18_199
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

207018..208724
DNA (1707bp) protein (569aa)
beta-lactamase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B40DA3 rbh
Putative major facilitator superfamily transporter {ECO:0000313|EMBL:GAO38541.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomona
hypothetical protein
scnpilot_cont_500_p_scaffold_18_200
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(208973..210289)
DNA (1317bp) protein (439aa)
FolC bifunctional protein (EC:6.3.2.17)
Bifunctional FolC protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z853_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO56227.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_cont_500_p_scaffold_18_201
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(210313..211167)
DNA (855bp) protein (285aa)
acetyl-CoA carboxylase carboxyl transferase subunit beta (EC:6.4.1.2)
acetyl-CoA carboxylase subunit beta n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B553FB rbh
Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395}; Short=ACCase subunit beta {ECO:0000256|HAMAP-Rule:MF_01395};; Short=Acetyl-CoA carboxylase carboxyltr
scnpilot_cont_500_p_scaffold_18_202
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(211164..211964)
DNA (801bp) protein (267aa)
trpA; tryptophan synthase subunit alpha (EC:4.2.1.20)
Tryptophan synthase alpha chain {ECO:0000255|HAMAP-Rule:MF_00131}; EC=4.2.1.20 {ECO:0000255|HAMAP-Rule:MF_00131};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
Tryptophan synthase alpha chain n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=TRPA_NOVAD rbh
scnpilot_cont_500_p_scaffold_18_203
unknown

Not on your lists

comp(211961..212140)
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_18_204
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(212137..213387)
DNA (1251bp) protein (417aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZSK3_9SPHN rbh
scnpilot_cont_500_p_scaffold_18_205
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

213689..214162
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A0Q1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48318.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_cont_500_p_scaffold_18_206
unknown

Not on your lists

214381..214845
DNA (465bp) protein (155aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_18_207
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(214888..215532)
DNA (645bp) protein (215aa)
N-(5'-phosphoribosyl)anthranilate isomerase {ECO:0000256|HAMAP-Rule:MF_00135, ECO:0000256|SAAS:SAAS00123216}; Short=PRAI {ECO:0000256|HAMAP-Rule:MF_00135};; EC=5.3.1.24 {ECO:0000256|HAMAP-Rule:MF_0013
N-(5'-phosphoribosyl)anthranilate isomerase (EC:5.3.1.24)
N-(5'-phosphoribosyl)anthranilate isomerase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z859_9SPHN
scnpilot_cont_500_p_scaffold_18_208
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(215537..216034)
DNA (498bp) protein (166aa)
N-acetyltransferase GCN5 n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI0003672FE3
GCN5-related N-acetyltransferase {ECO:0000313|EMBL:EGD59164.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
GCN5 family acetyltransferase
scnpilot_cont_500_p_scaffold_18_209
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(216040..216717)
DNA (678bp) protein (226aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01200, ECO:0000256|RuleBase:RU000512};; OMP decarboxylase
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VMQ9_9SPHN rbh
scnpilot_cont_500_p_scaffold_18_210
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(216727..217047)
DNA (321bp) protein (107aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WDZ5_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EIZ78446.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
Displaying items 181-210 of 293 in total

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