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scnpilot_cont_500_p_scaffold_18

Search features with annotation key words

Displaying items 211-240 of 293 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_18_211
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(217157..218470)
DNA (1314bp) protein (438aa)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YJG6_9SPHN rbh
scnpilot_cont_500_p_scaffold_18_212
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(218563..219366)
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WE23_9SPHN rbh
DNA repair protein radC {ECO:0000313|EMBL:GAO56212.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_18_213
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

219458..222634
DNA (3177bp) protein (1059aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ILH8_9SPHN rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA92280.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_18_214
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

222631..222954
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8R6_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA92281.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_18_215
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

222954..223349
DNA (396bp) protein (132aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8R5_NOVAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD25758.1}; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
scnpilot_cont_500_p_scaffold_18_216
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

223687..224007
DNA (321bp) protein (107aa)
Putative ATP synthase protein I n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8R4_NOVAD
ATP synthase I {ECO:0000313|EMBL:KHK91039.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium mala
ATP synthase I
scnpilot_cont_500_p_scaffold_18_217
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

224101..224889
DNA (789bp) protein (263aa)
ATP synthase F0F1 subunit A (EC:3.6.3.14)
F0F1 ATP synthase subunit A n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B30D2C rbh
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
scnpilot_cont_500_p_scaffold_18_218
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

224952..225179
DNA (228bp) protein (76aa)
ATP synthase C chain {ECO:0000313|EMBL:BAK66965.1}; EC=3.6.3.14 {ECO:0000313|EMBL:BAK66965.1};; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
ATP synthase C chain n=1 Tax=Sphingobium sp. SYK-6 RepID=G2II42_9SPHN
atpE; ATP synthase subunit C
scnpilot_cont_500_p_scaffold_18_219
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

225336..225827
DNA (492bp) protein (164aa)
ATP synthase subunit b n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8R1_NOVAD
H+-transporting two-sector ATPase subunit B/B'
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
scnpilot_cont_500_p_scaffold_18_220
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

225820..226374
DNA (555bp) protein (185aa)
ATP synthase subunit B n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B48DD8
ATP synthase subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATP synthase F(0) sector subunit b {ECO:0000256|HAMAP-Rule:MF_01398}; ATPase subunit I {ECO:0000256|HAMAP-Rule:MF_01398}; F-type ATPase subuni
H+-transporting two-sector ATPase subunit B/B'
scnpilot_cont_500_p_scaffold_18_221
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

226453..226647
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HBN6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB13746.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_18_222
unknown

Not on your lists

226835..227188
DNA (354bp) protein (118aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_18_223
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(227199..227957)
DNA (759bp) protein (253aa)
Hydroxyacylglutathione hydrolase {ECO:0000313|EMBL:AKH41272.1}; EC=3.1.2.6 {ECO:0000313|EMBL:AKH41272.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Eryth
hydroxyacylglutathione hydrolase (EC:3.1.2.6)
hydroxyacylglutathione hydrolase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B79EBF rbh
scnpilot_cont_500_p_scaffold_18_224
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(228276..229979)
DNA (1704bp) protein (568aa)
30S ribosomal protein S1 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8Q7_NOVAD rbh
30S ribosomal protein S1 {ECO:0000256|PIRNR:PIRNR002111}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing
rpsA; 30S ribosomal protein S1
scnpilot_cont_500_p_scaffold_18_225
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

230367..230810
DNA (444bp) protein (148aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI00035D51E4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EGD57701.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_18_226
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(230807..231445)
DNA (639bp) protein (213aa)
Cytidylate kinase {ECO:0000256|HAMAP-Rule:MF_00238}; Short=CK {ECO:0000256|HAMAP-Rule:MF_00238};; EC=2.7.4.25 {ECO:0000256|HAMAP-Rule:MF_00238};; Cytidine monophosphate kinase {ECO:0000256|HAMAP-Rule:
Cytidylate kinase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0HZX2_9SPHN rbh
cytidylate kinase
scnpilot_cont_500_p_scaffold_18_227
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(231442..231726)
DNA (285bp) protein (95aa)
permease n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5A23A
putative permease
Putative permease {ECO:0000313|EMBL:CCA92292.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp
scnpilot_cont_500_p_scaffold_18_228
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(231723..233063)
DNA (1341bp) protein (447aa)
3-phosphoshikimate 1-carboxyvinyltransferase (EC:2.5.1.19)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000255|HAMAP-Rule:MF_00210}; EC=2.5.1.19 {ECO:0000255|HAMAP-Rule:MF_00210};; 5-enolpyruvylshikimate-3-phosphate synthase {ECO:0000255|HAMAP-Rule:MF_0
3-phosphoshikimate 1-carboxyvinyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=AROA_NOVAD rbh
scnpilot_cont_500_p_scaffold_18_229
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

233278..233595
DNA (318bp) protein (106aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDB6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD57442.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_18_230
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


234076..235515
DNA (1440bp) protein (480aa)
Signal recognition particle protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EEV5_9SPHN rbh
RNA-binding protein
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphin
scnpilot_cont_500_p_scaffold_18_231
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


235542..235907
DNA (366bp) protein (122aa)
30S ribosomal protein S16 n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B4BA57
rpsP; 30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000255|HAMAP-Rule:MF_00385}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosp
scnpilot_cont_500_p_scaffold_18_232
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

235907..236404
DNA (498bp) protein (166aa)
Ribosome maturation factor RimM n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ILJ5_9SPHN
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
16S rRNA-processing protein RimM
scnpilot_cont_500_p_scaffold_18_233
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

236401..236757
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO87439.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter
scnpilot_cont_500_p_scaffold_18_234
R_Sphingopyxis_65_24, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

236877..237620
DNA (744bp) protein (248aa)
hypothetical protein n=1 Tax=Sphingomonas elodea RepID=UPI00026319F8
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_24_curated
scnpilot_cont_500_p_scaffold_18_235
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

237627..238418
DNA (792bp) protein (264aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EEW0_9SPHN rbh
tRNA (guanine-N1)-methyltransferase
scnpilot_cont_500_p_scaffold_18_236
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


238415..238795
DNA (381bp) protein (127aa)
50S ribosomal protein L19 n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A0K0_9SPHN
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; N
50S ribosomal protein L19
scnpilot_cont_500_p_scaffold_18_237
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

238922..241162
DNA (2241bp) protein (747aa)
dipeptidyl-peptidase IV (EC:3.4.14.5)
Dipeptidyl-peptidase IV n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9L9C2_9SPHN rbh
Dipeptidyl-peptidase IV {ECO:0000313|EMBL:EIZ81109.1}; TaxID=555793 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_18_238
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

241246..242271
DNA (1026bp) protein (342aa)
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
Aspartate-semialdehyde dehydrogenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8G9_NOVAD rbh
scnpilot_cont_500_p_scaffold_18_239
Sphingobium sp. AP49, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

242273..242908
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Porphyrobacter sp. AAP82 RepID=UPI00036DD86F
Putative membrane protein {ECO:0000313|EMBL:EJK86107.1}; Flags: Precursor;; TaxID=1144307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" so
hypothetical protein
scnpilot_cont_500_p_scaffold_18_240
Sphingomonas changbaiensis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(242942..243610)
DNA (669bp) protein (223aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PAMC 26621 RepID=UPI00028911F0
Uncharacterized protein {ECO:0000313|EMBL:GAO39627.1}; TaxID=1219043 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas c
hypothetical protein
Displaying items 211-240 of 293 in total

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