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scnpilot_cont_500_p_scaffold_18

Search features with annotation key words

Displaying items 271-293 of 293 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_18_271
Sphingobium sp. YBL2, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(275523..278336)
DNA (2814bp) protein (938aa)
TonB-dependent receptor n=1 Tax=Sphingobium indicum B90A RepID=I5BEH1_9SPHN rbh
TonB-dependent receptor {ECO:0000313|EMBL:AJR24363.1}; TaxID=484429 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
TonB-dependent receptor
scnpilot_cont_500_p_scaffold_18_272
Beijerinckia indica, Beijerinckia, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(278679..279677)
DNA (999bp) protein (333aa)
Poly (3-hydroxybutyrate) depolymerase n=1 Tax=Beijerinckia indica subsp. indica (strain ATCC 9039 / DSM 1715 / NCIB 8712) RepID=B2IFV0_BEII9 rbh
poly (3-hydroxybutyrate) depolymerase
Poly (3-hydroxybutyrate) depolymerase {ECO:0000313|EMBL:ACB95689.1}; Flags: Precursor;; TaxID=395963 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Beijerinckia
scnpilot_cont_500_p_scaffold_18_273
Tistrella mobilis, Tistrella, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(279804..281090)
DNA (1287bp) protein (429aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1110502 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillacea
Putative two-component histidine kinase (Fragment) n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZXU3_9SPHN
cpxA; Sensor protein cpxA
scnpilot_cont_500_p_scaffold_18_274
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(281087..281782)
DNA (696bp) protein (232aa)
Putative two-component response regulator n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U3A647_9SPHN
Putative two-component response regulator {ECO:0000313|EMBL:GAD50213.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" s
two component transcriptional regulator, winged helix family
scnpilot_cont_500_p_scaffold_18_275
Sphingobium quisquiliarum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

281900..283351
DNA (1452bp) protein (484aa)
Uncharacterized protein n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0ISG5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB14765.1}; TaxID=1329909 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium qui
RND efflux system outer membrane lipoprotein
scnpilot_cont_500_p_scaffold_18_276
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

283348..284430
DNA (1083bp) protein (361aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E735_9SPHN rbh
secretion protein HlyD
Uncharacterized protein {ECO:0000313|EMBL:EHJ62862.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_cont_500_p_scaffold_18_277
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

284435..287560
DNA (3126bp) protein (1042aa)
Cation/multidrug efflux pump acrB n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E734_9SPHN rbh
Cation/multidrug efflux pump acrB {ECO:0000313|EMBL:EHJ62861.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="N
multidrug transporter AcrB
scnpilot_cont_500_p_scaffold_18_278
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(287557..288837)
DNA (1281bp) protein (427aa)
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S8F1_9SPHN rbh
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase
PAS/PAC and Chase sensor-containing diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:AGH51238.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingom
scnpilot_cont_500_p_scaffold_18_279
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

289153..289788
DNA (636bp) protein (212aa)
hypothetical protein n=1 Tax=Sphingomonas echinoides RepID=UPI00026CBFF3
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD25079.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_18_280
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(289911..292328)
DNA (2418bp) protein (806aa)
TonB-denpendent receptor n=1 Tax=Sphingomonas sp. PAMC 26617 RepID=UPI00028873C3 rbh
Putative TonB-dependent receptor {ECO:0000313|EMBL:GAM01332.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphin
TonB-dependent receptor
scnpilot_cont_500_p_scaffold_18_281
Burkholderia sp. Ch1-1, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(292622..293731)
DNA (1110bp) protein (370aa)
Bacterial capsule synthesis protein PGA_cap n=1 Tax=Burkholderia sp. Ch1-1 RepID=I2IMJ4_9BURK rbh
Bacterial capsule synthesis protein PGA_cap {ECO:0000313|EMBL:EIF31946.1}; TaxID=243261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia.;" source
poly-gamma-glutamate biosynthesis protein
scnpilot_cont_500_p_scaffold_18_282
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(293748..294770)
DNA (1023bp) protein (341aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6ICP5_9SPHN rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCA90070.1}; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_18_283
Rhizobium sp. CF122, Rhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

294965..295330
DNA (366bp) protein (122aa)
feruloyl-CoA synthase n=1 Tax=Rhizobium RepID=UPI0003828650
Uncharacterized protein {ECO:0000313|EMBL:EJL58635.1}; TaxID=1144312 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Rhizobium.;" sour
hypothetical protein
scnpilot_cont_500_p_scaffold_18_284
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(295334..296227)
DNA (894bp) protein (298aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y5N1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD48431.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
alpha/beta hydrolase
scnpilot_cont_500_p_scaffold_18_285
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

296469..297452
DNA (984bp) protein (328aa)
LuxR family transcriptional regulator n=1 Tax=Sphingomonas sp. LH128 RepID=J8VWG3_9SPHN
LuxR family transcriptional regulator {ECO:0000313|EMBL:EZP81792.1}; TaxID=158500 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain
scnpilot_cont_500_p_scaffold_18_286
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(297523..297993)
DNA (471bp) protein (157aa)
Heat shock protein Hsp20 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6S0_NOVAD
16 kDa heat shock protein A {ECO:0000313|EMBL:GAO55975.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosph
heat shock protein Hsp20
scnpilot_cont_500_p_scaffold_18_287
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

298159..298422
DNA (264bp) protein (88aa)
glutaredoxin n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B78C33
Glutaredoxin {ECO:0000313|EMBL:EJU12332.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp. LH128.;"
glutaredoxin
scnpilot_cont_500_p_scaffold_18_288
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

298424..299245
DNA (822bp) protein (274aa)
nitrilase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B74240 rbh
Nitrilase {ECO:0000313|EMBL:EQB11974.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium lindanicl
nitrilase
scnpilot_cont_500_p_scaffold_18_289
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

299252..299737
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B37F74
Uncharacterized protein {ECO:0000313|EMBL:GAO55979.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_18_290
Thalassospira xiamenensis, Thalassospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(300372..300617)
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Thalassospira xiamenensis M-5 = DSM 17429 RepID=K2L4D9_9PROT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJD53581.1}; TaxID=1123366 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Thalassospira.;" source="Thalassospira
scnpilot_cont_500_p_scaffold_18_291
Phaeospirillum molischianum, Phaeospirillum, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

300676..301332
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Phaeospirillum molischianum DSM 120 RepID=H8FP34_PHAMO
Uncharacterized protein {ECO:0000313|EMBL:CCG40122.1}; TaxID=1150626 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Phaeospirillum.;" source="Phaeospirill
hypothetical protein
scnpilot_cont_500_p_scaffold_18_292
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(301485..301715)
DNA (231bp) protein (77aa)
Uncharacterized protein n=1 Tax=Sphingobium sp. HDIP04 RepID=T0I0N9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EQB05225.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
scnpilot_cont_500_p_scaffold_18_293
unknown

Not on your lists

301798..301995
DNA (198bp) protein (66aa)

This feature has no annotations

Displaying items 271-293 of 293 in total

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