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scnpilot_cont_500_p_scaffold_18

Search features with annotation key words

Displaying items 241-270 of 293 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_18_241
unknown

Not on your lists

243830..244132
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_18_242
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

244312..245091
DNA (780bp) protein (260aa)
Alpha/beta hydrolase n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E7B1_9SPHN rbh
Hydrolase {ECO:0000313|EMBL:KHK91762.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium malaysien
hydrolase
scnpilot_cont_500_p_scaffold_18_243
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(245081..245857)
DNA (777bp) protein (259aa)
TonB family protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9N4_9SPHN
TonB family protein {ECO:0000313|EMBL:EGD58708.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
TonB-like protein
scnpilot_cont_500_p_scaffold_18_244
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(245939..246904)
DNA (966bp) protein (322aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036A8E13 rbh
Thiamin biosynthesis lipoprotein apbE {ECO:0000313|EMBL:GAO55187.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
thiamine biosynthesis protein ApbE
scnpilot_cont_500_p_scaffold_18_245
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(246904..247785)
DNA (882bp) protein (294aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI000380AC3A rbh
Uncharacterized protein {ECO:0000313|EMBL:GAM00504.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
nickel uptake transporter family protein
scnpilot_cont_500_p_scaffold_18_246
Sphingobium sp. SYK-6, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(247815..248300)
DNA (486bp) protein (162aa)
Putative uncharacterized protein n=1 Tax=Sphingobium sp. SYK-6 RepID=G2IPE6_9SPHN
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:BAK68127.1}; TaxID=627192 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingo
scnpilot_cont_500_p_scaffold_18_247
Sphingomonas parapaucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(248313..248936)
DNA (624bp) protein (208aa)
membrane protein n=1 Tax=Sphingomonas wittichii RepID=UPI000318D244
Uncharacterized protein {ECO:0000313|EMBL:GAM00502.1}; TaxID=1219049 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas p
PepSY-associated TM helix domain-containing protein
scnpilot_cont_500_p_scaffold_18_248
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(248933..249667)
DNA (735bp) protein (245aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9N3_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD58709.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_18_249
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(249670..252009)
DNA (2340bp) protein (780aa)
TonB-dependent siderophore receptor n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z9N2_9SPHN rbh
TonB-dependent siderophore receptor {ECO:0000313|EMBL:EGD58710.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="
TonB-dependent siderophore receptor
scnpilot_cont_500_p_scaffold_18_250
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

252313..253575
DNA (1263bp) protein (421aa)
Metal dependent phosphohydrolase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZBH8_9SPHN rbh
Metal dependent phosphohydrolase {ECO:0000313|EMBL:KHS48864.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
metal dependent phosphohydrolase
scnpilot_cont_500_p_scaffold_18_251
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(253581..254492)
DNA (912bp) protein (304aa)
LysR family transcriptional regulator n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZAP0_9SPHN rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EGD58323.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_18_252
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

254792..256132
DNA (1341bp) protein (447aa)
Adenosine/AMP deaminase n=1 Tax=Sphingomonas sp. LH128 RepID=J8VQL6_9SPHN rbh
Adenosine/AMP deaminase {ECO:0000313|EMBL:EJU10328.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
adenosine/AMP deaminase
scnpilot_cont_500_p_scaffold_18_253
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

256243..258657
DNA (2415bp) protein (805aa)
TonB-dependent receptor n=1 Tax=Sphingomonas sp. LH128 RepID=J8VBX5_9SPHN rbh
TonB-dependent receptor {ECO:0000313|EMBL:EJU10327.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas sp
TonB-dependent receptor
scnpilot_cont_500_p_scaffold_18_254
Sphingobium japonicum, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

258719..259855
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002F7CAB2 rbh
Purine nucleoside permease {ECO:0000313|EMBL:CCW16432.1}; TaxID=1301087 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium
putative purine nucleoside permease
scnpilot_cont_500_p_scaffold_18_255
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(259852..260589)
DNA (738bp) protein (246aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:KHS45041.1}; EC=4.2.1.17 {ECO:0000313|EMBL:KHS45041.1};; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
Enoyl-CoA hydratase/isomerase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=A4XEF6_NOVAD
enoyl-CoA hydratase/isomerase
scnpilot_cont_500_p_scaffold_18_256
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(260667..261887)
DNA (1221bp) protein (407aa)
Poly-beta-hydroxyalkanoate depolymerase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z8X3_9SPHN rbh
Poly-beta-hydroxyalkanoate depolymerase {ECO:0000313|EMBL:EGD58866.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour
poly(3-hydroxybutyrate) depolymerase
scnpilot_cont_500_p_scaffold_18_257
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

262033..262686
DNA (654bp) protein (218aa)
Glutathione S-transferase domain protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z8X2_9SPHN rbh
Glutathione S-transferase domain protein {ECO:0000313|EMBL:EGD58867.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sou
glutathione S-transferase
scnpilot_cont_500_p_scaffold_18_258
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

262796..264124
DNA (1329bp) protein (443aa)
hypothetical protein n=1 Tax=Sphingobium sp. YL23 RepID=UPI0003B614CF rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO54612.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_18_259
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

264171..265103
DNA (933bp) protein (311aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8F7_NOVAD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD25866.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_18_260
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(265130..265525)
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDB9_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD57439.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
scnpilot_cont_500_p_scaffold_18_261
R_Sphingopyxis_65_20, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(265625..267226)
DNA (1602bp) protein (534aa)
methyl-accepting chemotaxis protein n=1 Tax=Sphingomonas sp. KC8 RepID=UPI000248A3A4 rbh
methyl-accepting chemotaxis sensory transducer Tax=RIFCSPHIGHO2_01_FULL_Sphingopyxis_65_20_curated
methyl-accepting chemotaxis sensory transducer
scnpilot_cont_500_p_scaffold_18_262
Sphaerotilus natans, Sphaerotilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

267496..267711
DNA (216bp) protein (72aa)
hypothetical protein n=1 Tax=Novosphingobium nitrogenifigens RepID=UPI0002DB9CDC
Uncharacterized protein {ECO:0000313|EMBL:KDB51089.1}; TaxID=1286631 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sphaerotilus.;" source="Sphaerotilus natans subsp. natans D
scnpilot_cont_500_p_scaffold_18_263
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

267683..268711
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037D303E rbh
Uncharacterized protein {ECO:0000313|EMBL:EGD58547.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_18_264
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(268775..270181)
DNA (1407bp) protein (469aa)
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8F4_NOVAD rbh
UDP-N-acetylmuramate--alanine ligase {ECO:0000313|EMBL:KHK91748.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source
scnpilot_cont_500_p_scaffold_18_265
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

270296..271108
DNA (813bp) protein (271aa)
Putative MccF-like protein (Microcin C7 resistance) n=1 Tax=Novosphingobium sp. AP12 RepID=J2G558_9SPHN rbh
Putative MccF-like protein (Microcin C7 resistance) {ECO:0000313|EMBL:EJL24825.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphing
carboxypeptidase
scnpilot_cont_500_p_scaffold_18_266
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

271234..272124
DNA (891bp) protein (297aa)
Malonyl CoA-acyl carrier protein transacylase {ECO:0000256|PIRNR:PIRNR000446}; EC=2.3.1.39 {ECO:0000256|PIRNR:PIRNR000446};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphin
[acyl-carrier-protein] S-malonyltransferase (EC:2.3.1.39)
Malonyl CoA-acyl carrier protein transacylase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8F2_NOVAD rbh
scnpilot_cont_500_p_scaffold_18_267
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

272128..272880
DNA (753bp) protein (251aa)
3-oxoacyl-[acyl-carrier-protein] reductase (EC:1.1.1.100)
3-oxoacyl-[acyl-carrier-protein] reductase {ECO:0000313|EMBL:ABD25872.1}; EC=1.1.1.100 {ECO:0000313|EMBL:ABD25872.1};; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobac
3-oxoacyl-ACP synthase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B75872 rbh
scnpilot_cont_500_p_scaffold_18_268
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(272934..274016)
DNA (1083bp) protein (361aa)
DNA replication and repair protein RecF n=1 Tax=Novosphingobium sp. AP12 RepID=J2ZSV6_9SPHN rbh
DNA replication and repair protein RecF {ECO:0000256|HAMAP-Rule:MF_00365, ECO:0000256|RuleBase:RU000578}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphing
DNA replication and repair protein RecF
scnpilot_cont_500_p_scaffold_18_269
R_Erythrobacter_63_10, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

274208..274411
DNA (204bp) protein (68aa)
Phage shock protein C, PspC n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5E2_NOVAD
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Erythrobacter_63_10_curated
phage shock protein C, PspC
scnpilot_cont_500_p_scaffold_18_270
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(274686..275432)
DNA (747bp) protein (249aa)
Conserved hypothetical integral membrane protein n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5V3C4_SPHWW
Uncharacterized protein {ECO:0000313|EMBL:AKH42345.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
Displaying items 241-270 of 293 in total

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