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scnpilot_cont_500_p_scaffold_48

Search features with annotation key words

Displaying items 121-150 of 171 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_48_121
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(135700..139191)
DNA (3492bp) protein (1164aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=473781 species="Bacteria; Pr
Transcription-repair-coupling factor n=1 Tax=Sphingomonas sp. LH128 RepID=J8SBP5_9SPHN rbh
transcription-repair coupling factor
scnpilot_cont_500_p_scaffold_48_122
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139382..139666)
DNA (285bp) protein (95aa)
hypothetical protein n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B6EA6E
Scaffold6, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32223.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
hypothetical protein
scnpilot_cont_500_p_scaffold_48_123
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(139727..140113)
DNA (387bp) protein (129aa)
AtsE n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G6V3_NOVAD
AtsE
AtsE {ECO:0000313|EMBL:ABD26420.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium aromaticivorans
scnpilot_cont_500_p_scaffold_48_124
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

140275..142332
DNA (2058bp) protein (686aa)
ATP-dependent DNA helicase RecG n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YHI1_9SPHN rbh
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:GAD47332.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
DEAD/DEAH box helicase-like protein
scnpilot_cont_500_p_scaffold_48_125
Microvirga lotononidis, Microvirga, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(142572..143531)
DNA (960bp) protein (320aa)
Lactate dehydrogenase-like oxidoreductase n=1 Tax=Microvirga sp. WSM3557 RepID=I4YTI5_9RHIZ rbh
Lactate dehydrogenase-like oxidoreductase {ECO:0000313|EMBL:EIM27277.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Mi
NAD-binding D-isomer specific 2-hydroxyacid dehydrogenase
scnpilot_cont_500_p_scaffold_48_126
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

143739..144590
DNA (852bp) protein (284aa)
Putative uncharacterized protein n=2 Tax=Novosphingobium nitrogenifigens RepID=F1Z6Y8_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD59592.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_48_127
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(144688..145623)
DNA (936bp) protein (312aa)
2OG-Fe(II) oxygenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8P9_NOVAD rbh
2OG-Fe(II) oxygenase
2OG-Fe(II) oxygenase {ECO:0000313|EMBL:ABD25774.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
scnpilot_cont_500_p_scaffold_48_128
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

145701..146120
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EEZ7_9SPHN
ubiquinol-cytochrome C reductase
Uncharacterized protein {ECO:0000313|EMBL:EHJ60123.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_cont_500_p_scaffold_48_129
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(146551..147912)
DNA (1362bp) protein (454aa)
Putative major facilitator superfamily transporter n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZYC2_9SPHN rbh
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:GAO56947.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium
major facilitator transporter
scnpilot_cont_500_p_scaffold_48_130
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

148160..148753
DNA (594bp) protein (198aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (EC:2.7.8.5)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase {ECO:0000313|EMBL:ABD25779.1}; EC=2.7.8.5 {ECO:0000313|EMBL:ABD25779.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteo
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G8P4_NOVAD rbh
scnpilot_cont_500_p_scaffold_48_131
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(148958..149590)
DNA (633bp) protein (211aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDP6_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:EGD57370.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingob
hypothetical protein
scnpilot_cont_500_p_scaffold_48_132
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(149637..150533)
DNA (897bp) protein (299aa)
LysR family transcriptional regulator n=1 Tax=Sphingomonas sp. LH128 RepID=J8V8V4_9SPHN rbh
LysR family transcriptional regulator {ECO:0000313|EMBL:EJU09277.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="S
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_48_133
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(150530..151768)
DNA (1239bp) protein (413aa)
Ribonuclease D {ECO:0000256|HAMAP-Rule:MF_01899}; Short=RNase D {ECO:0000256|HAMAP-Rule:MF_01899};; EC=3.1.13.5 {ECO:0000256|HAMAP-Rule:MF_01899};; TaxID=48936 species="Bacteria; Proteobacteria; Alpha
Ribonuclease D n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZDP4_9SPHN rbh
ribonuclease D
scnpilot_cont_500_p_scaffold_48_134
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists


152006..153811
DNA (1806bp) protein (602aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
aspartyl-tRNA synthetase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B37E20 rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO56943.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_cont_500_p_scaffold_48_135
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154295..154531
DNA (237bp) protein (79aa)
Acyl carrier protein n=1 Tax=Sphingomonas sp. MM-1 RepID=M4RZK3_9SPHN
acpP; acyl carrier protein
Acyl carrier protein {ECO:0000256|HAMAP-Rule:MF_01217, ECO:0000256|RuleBase:RU003545}; Short=ACP {ECO:0000256|HAMAP-Rule:MF_01217};; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria
scnpilot_cont_500_p_scaffold_48_136
Sphingopyxis sp. MC1, Sphingopyxis, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

154805..156067
DNA (1263bp) protein (421aa)
3-oxoacyl-[acyl-carrier-protein] synthase 2 {ECO:0000256|PIRNR:PIRNR000447}; EC=2.3.1.179 {ECO:0000256|PIRNR:PIRNR000447};; TaxID=1174684 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphing
fabF; 3-oxoacyl-[acyl-carrier-protein] synthase 2 (EC:2.3.1.179)
3-oxoacyl-[acyl-carrier-protein] synthase 2 n=1 Tax=Sphingopyxis sp. MC1 RepID=N9WGZ5_9SPHN rbh
scnpilot_cont_500_p_scaffold_48_137
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

156199..157170
DNA (972bp) protein (324aa)
aminodeoxychorismate lyase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5EFD4 rbh
Aminodeoxychorismate lyase {ECO:0000313|EMBL:KHK91100.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphi
aminodeoxychorismate lyase
scnpilot_cont_500_p_scaffold_48_138
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(157167..157589)
DNA (423bp) protein (141aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002FFBD0F
Putative arabinose efflux permease {ECO:0000313|EMBL:EJU09270.1}; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphi
hypothetical protein
scnpilot_cont_500_p_scaffold_48_139
unknown

Not on your lists

157638..157817
DNA (180bp) protein (60aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_48_140
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

158075..159310
DNA (1236bp) protein (412aa)
Integrase n=1 Tax=Phaeospirillum fulvum MGU-K5 RepID=S9TLS3_PHAFV
Uncharacterized protein {ECO:0000313|EMBL:KHK91873.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
integrase
scnpilot_cont_500_p_scaffold_48_141
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159452..159700
DNA (249bp) protein (83aa)
XRE family transcriptional regulator n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B66E6D
Antitoxin HipB {ECO:0000313|EMBL:AKH43590.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Altererythrobact
XRE family transcriptional regulator
scnpilot_cont_500_p_scaffold_48_142
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

159702..161027
DNA (1326bp) protein (442aa)
Serine/threonine-protein kinase HipA {ECO:0000313|EMBL:AKH43589.1}; EC=2.7.11.1 {ECO:0000313|EMBL:AKH43589.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales;
toxin HipA n=1 Tax=Sphingomonas-like bacterium B12 RepID=UPI0003B6904C rbh
toxin HipA
scnpilot_cont_500_p_scaffold_48_143
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

161425..162003
DNA (579bp) protein (193aa)
Sigma-70 family RNA polymerase sigma factor n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CMT9_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:AHE55565.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
ECF subfamily RNA polymerase sigma-24 factor
scnpilot_cont_500_p_scaffold_48_144
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

162003..163085
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9D7T9_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:AHE55566.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
fecR; Fe2+-dicitrate sensor membrane component
scnpilot_cont_500_p_scaffold_48_145
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

163152..165752
DNA (2601bp) protein (867aa)
TonB-dependent receptor n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEQ5_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE55567.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
TonB-dependent receptor-like protein
scnpilot_cont_500_p_scaffold_48_146
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

165785..167911
DNA (2127bp) protein (709aa)
Acylaminoacyl-peptidase n=1 Tax=Sphingomonas sp. SKA58 RepID=Q1NEQ6_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE55568.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
putative peptidase
scnpilot_cont_500_p_scaffold_48_147
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(167944..169725)
DNA (1782bp) protein (594aa)
asparagine synthase (EC:6.3.5.4)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CNY3_SPHYA rbh
Uncharacterized protein {ECO:0000313|EMBL:AHE55569.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
scnpilot_cont_500_p_scaffold_48_148
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(169725..170399)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Sphingobium yanoikuyae ATCC 51230 RepID=K9CMU4_SPHYA
Uncharacterized protein {ECO:0000313|EMBL:AHE55570.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
hypothetical protein
scnpilot_cont_500_p_scaffold_48_149
unknown

Not on your lists

comp(170465..170605)
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_48_150
Sphingomonas sanxanigenens, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(170731..171342)
DNA (612bp) protein (204aa)
hypothetical protein n=1 Tax=Sphingobium xenophagum RepID=UPI0002EE891F
Uncharacterized protein {ECO:0000313|EMBL:AHE55572.1}; TaxID=1123269 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas s
GntR family transcriptional regulator
Displaying items 121-150 of 171 in total

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