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scnpilot_cont_500_p_scaffold_57

Search features with annotation key words

Displaying items 61-90 of 153 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_57_61
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61126..61431)
DNA (306bp) protein (102aa)
NADH-quinone oxidoreductase subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01456};; NADH dehydrogenase I subunit K {ECO:0000256|HAMAP-Rule:MF_01456}; NDH-1 subunit
NADH-quinone oxidoreductase subunit K n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9C9Z6_9SPHN
NADH-ubiquinone oxidoreductase, chain 4L
scnpilot_cont_500_p_scaffold_57_62
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(61442..62059)
DNA (618bp) protein (206aa)
NADH:ubiquinone oxidoreductase subunit J n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B46717 rbh
NADH-quinone oxidoreductase subunit J {ECO:0000313|EMBL:GAD47954.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
NADH:ubiquinone oxidoreductase subunit J
scnpilot_cont_500_p_scaffold_57_63
Erythrobacter sp. SD-21, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62081..62566)
DNA (486bp) protein (162aa)
NADH-quinone oxidoreductase subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01351};; NADH dehydrogenase I subunit I {ECO:0000256|HAMAP-Rule:MF_01351}; NDH-1 subunit
NADH-quinone oxidoreductase subunit I n=1 Tax=Erythrobacter sp. SD-21 RepID=A5P7S9_9SPHN rbh
NADH dehydrogenase subunit I
scnpilot_cont_500_p_scaffold_57_64
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(62563..63609)
DNA (1047bp) protein (349aa)
NADH-quinone oxidoreductase subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01350};; NADH dehydrogenase I subunit H {ECO:0000256|HAMAP-Rule:MF_01350}; NDH-1 subunit
NADH:ubiquinone oxidoreductase subunit H (EC:1.6.99.5)
NADH-quinone oxidoreductase subunit H n=2 Tax=Novosphingobium RepID=F6IQ08_9SPHN rbh
scnpilot_cont_500_p_scaffold_57_65
Novosphingobium sp. PP1Y, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(63606..65630)
DNA (2025bp) protein (675aa)
NADH dehydrogenase I subunit G {ECO:0000313|EMBL:CCA93511.1}; EC=1.6.5.3 {ECO:0000313|EMBL:CCA93511.1};; TaxID=702113 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingom
NADH dehydrogenase (EC:1.6.99.5)
NADH dehydrogenase I subunit G n=1 Tax=Novosphingobium sp. PP1Y RepID=F6IQ09_9SPHN rbh
scnpilot_cont_500_p_scaffold_57_66
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(65630..66925)
DNA (1296bp) protein (432aa)
NADH dehydrogenase I subunit F (EC:1.6.99.5)
NADH dehydrogenase subunit F {ECO:0000313|EMBL:ABD26732.1}; EC=1.6.5.3 {ECO:0000313|EMBL:ABD26732.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomon
NADH dehydrogenase subunit F n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Z1_NOVAD rbh
scnpilot_cont_500_p_scaffold_57_67
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(66929..67597)
DNA (669bp) protein (223aa)
NADH dehydrogenase I subunit E (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit E n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZRG7_9SPHN rbh
NADH-quinone oxidoreductase subunit E {ECO:0000313|EMBL:GAD47959.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sourc
scnpilot_cont_500_p_scaffold_57_68
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67597..67947)
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Y7_NOVAD
SnoaL-like domain protein {ECO:0000313|EMBL:KHS49180.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_57_69
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(67944..69158)
DNA (1215bp) protein (405aa)
NADH-quinone oxidoreductase subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01358};; NADH dehydrogenase I subunit D {ECO:0000256|HAMAP-Rule:MF_01358}; NDH-1 subunit
NADH dehydrogenase subunit D (EC:1.6.5.3)
NADH-quinone oxidoreductase subunit D n=1 Tax=Sphingomonas sp. LH128 RepID=J8S9M9_9SPHN rbh
scnpilot_cont_500_p_scaffold_57_70
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69155..69781)
DNA (627bp) protein (209aa)
NADH-quinone oxidoreductase subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01357};; NADH dehydrogenase I subunit C {ECO:0000256|HAMAP-Rule:MF_01357}; NDH-1 subunit
NADH (or F420H2) dehydrogenase subunit C (EC:1.6.99.3)
NADH-quinone oxidoreductase subunit C n=1 Tax=Sphingomonas sp. LH128 RepID=J8VG76_9SPHN rbh
scnpilot_cont_500_p_scaffold_57_71
Novosphingobium sp. Rr 2-17, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(69793..70347)
DNA (555bp) protein (185aa)
NADH-quinone oxidoreductase subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01356};; NADH dehydrogenase I subunit B {ECO:0000256|HAMAP-Rule:MF_01356}; NDH-1 subunit
NADH-quinone oxidoreductase subunit B n=1 Tax=Novosphingobium sp. Rr 2-17 RepID=I9WJ28_9SPHN rbh
NADH-quinone oxidoreductase subunit B
scnpilot_cont_500_p_scaffold_57_72
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(70344..70730)
DNA (387bp) protein (129aa)
NADH-quinone oxidoreductase subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_01394};; NADH dehydrogenase I subunit A {ECO:0000256|HAMAP-Rule:MF_01394}; NDH-1 subunit
NADH-quinone oxidoreductase subunit A n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5Y3_NOVAD
NADH-ubiquinone/plastoquinone oxidoreductase, chain 3
scnpilot_cont_500_p_scaffold_57_73
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

71040..72233
DNA (1194bp) protein (398aa)
Acetyl-CoA C-acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1Z950_9SPHN rbh
Acetyl-CoA C-acetyltransferase {ECO:0000313|EMBL:EGD58930.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
scnpilot_cont_500_p_scaffold_57_74
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72541..73035)
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y4H1_9SPHN
Uncharacterized protein {ECO:0000313|EMBL:GAD47966.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_57_75
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(73182..74588)
DNA (1407bp) protein (469aa)
2-nitropropane dioxygenase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B42B8F rbh
2-nitropropane dioxygenase
2-nitropropane dioxygenase, NPD {ECO:0000313|EMBL:ABD26749.1}; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
scnpilot_cont_500_p_scaffold_57_76
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(74768..75688)
DNA (921bp) protein (307aa)
Beta-lactamase {ECO:0000256|SAAS:SAAS00063099}; EC=3.5.2.6 {ECO:0000256|SAAS:SAAS00063099};; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae;
Putative beta-lactamase class A n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2Y7P4_9SPHN
beta-lactamase L2 precursor
scnpilot_cont_500_p_scaffold_57_77
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(75688..76815)
DNA (1128bp) protein (376aa)
Peptide chain release factor 2 n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6EIK6_9SPHN rbh
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1348853 species="Bacteria; Proteobacteria; Alphapr
peptide chain release factor RF-2
scnpilot_cont_500_p_scaffold_57_78
unknown

Not on your lists

comp(76934..77026)
DNA (93bp) protein (31aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_57_79
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(77185..77742)
DNA (558bp) protein (186aa)
Peroxiredoxin n=1 Tax=Novosphingobium sp. AP12 RepID=J2HCQ7_9SPHN
Scaffold6, whole genome shotgun sequence {ECO:0000313|EMBL:KIS32024.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
alkyl hydroperoxide reductase/Thiol specific antioxidant/Mal allergen
scnpilot_cont_500_p_scaffold_57_80
Sphingobium sp. ba1, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

77754..78704
DNA (951bp) protein (317aa)
Uncharacterized protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G7C8_NOVAD
Uncharacterized protein {ECO:0000313|EMBL:KFL47168.1}; TaxID=1522072 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium sp.
hypothetical protein
scnpilot_cont_500_p_scaffold_57_81
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

78715..79476
DNA (762bp) protein (254aa)
metallophosphoesterase n=1 Tax=Xanthomonas sacchari RepID=UPI000262AFCD
metallophosphoesterase
Metallophosphoesterase {ECO:0000313|EMBL:ABQ69935.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas wit
scnpilot_cont_500_p_scaffold_57_82
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(79489..82083)
DNA (2595bp) protein (865aa)
peptidoglycan glycosyltransferase (EC:2.4.1.129)
Peptidoglycan glycosyltransferase {ECO:0000313|EMBL:ABD26753.1}; EC=2.4.1.129 {ECO:0000313|EMBL:ABD26753.1};; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sph
Peptidoglycan glycosyltransferase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5X0_NOVAD rbh
scnpilot_cont_500_p_scaffold_57_83
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(82127..83137)
DNA (1011bp) protein (337aa)
N-acetylmuramoyl-L-alanine amidase AmiA {ECO:0000313|EMBL:AKH41700.1}; EC=3.5.1.28 {ECO:0000313|EMBL:AKH41700.1};; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadale
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IB76_9SPHN
N-acetylmuramoyl-L-alanine amidase
scnpilot_cont_500_p_scaffold_57_84
Novosphingobium resinovorum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

83982..86768
DNA (2787bp) protein (929aa)
Ribonuclease E {ECO:0000256|HAMAP-Rule:MF_00970}; Short=RNase E {ECO:0000256|HAMAP-Rule:MF_00970};; EC=3.1.26.12 {ECO:0000256|HAMAP-Rule:MF_00970};; TaxID=158500 species="Bacteria; Proteobacteria; Alp
ribonuclease E (EC:3.1.4.-)
Ribonuclease E n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5W8_NOVAD rbh
scnpilot_cont_500_p_scaffold_57_85
Sphingomonas sp. LH128, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

87031..87813
DNA (783bp) protein (261aa)
Succinate dehydrogenase iron-sulfur subunit {ECO:0000256|RuleBase:RU361237}; EC=1.3.5.1 {ECO:0000256|RuleBase:RU361237};; TaxID=473781 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomo
succinate dehydrogenase iron-sulfur protein (EC:1.3.99.1)
Succinate dehydrogenase iron-sulfur subunit n=1 Tax=Sphingomonas sp. LH128 RepID=J8VAU1_9SPHN rbh
scnpilot_cont_500_p_scaffold_57_86
unknown

Not on your lists

87968..88375
DNA (408bp) protein (136aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_57_87
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

88394..89533
DNA (1140bp) protein (380aa)
Putative ATPase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZRI8_9SPHN rbh
Putative ATPase {ECO:0000313|EMBL:GAD47979.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium tar
ATPase
scnpilot_cont_500_p_scaffold_57_88
Erythrobacter sp. JL475, Erythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(89582..90529)
DNA (948bp) protein (316aa)
enoyl-CoA hydratase (EC:4.2.1.17)
Putative enoyl-CoA hydratase n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YI67_9SPHN rbh
Enoyl-CoA hydratase {ECO:0000313|EMBL:KEO87317.1}; TaxID=383381 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Erythrobacter.;" source="Erythrobacter sp.
scnpilot_cont_500_p_scaffold_57_89
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(90715..92625)
DNA (1911bp) protein (637aa)
Asparagine synthetase n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0GY79_9SPHN rbh
Asparagine synthase {ECO:0000313|EMBL:EQB08951.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium
asparagine synthase
scnpilot_cont_500_p_scaffold_57_90
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(92637..94178)
DNA (1542bp) protein (514aa)
Exosortase A n=1 Tax=Novosphingobium sp. AP12 RepID=J3AQL8_9SPHN rbh
Exosortase A {ECO:0000313|EMBL:EJL35349.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium sp. AP
ABC transporter
Displaying items 61-90 of 153 in total

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