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scnpilot_cont_500_p_scaffold_57

Search features with annotation key words

Displaying items 91-120 of 153 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_57_91
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(94175..95410)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IH34_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB08949.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
group 1 glycosyl transferase
scnpilot_cont_500_p_scaffold_57_92
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(95420..96499)
DNA (1080bp) protein (360aa)
Putative uncharacterized protein n=1 Tax=Novosphingobium sp. PP1Y RepID=F6INM9_9SPHN rbh
FemAB
Uncharacterized protein {ECO:0000313|EMBL:EHJ62685.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
scnpilot_cont_500_p_scaffold_57_93
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(96496..97398)
DNA (903bp) protein (301aa)
Polysaccharide deacetylase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5V5_NOVAD rbh
Polysaccharide deacetylase {ECO:0000313|EMBL:KHS49212.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphing
polysaccharide deacetylase
scnpilot_cont_500_p_scaffold_57_94
Novosphingobium sp. AP12, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(97439..98647)
DNA (1209bp) protein (403aa)
Putative secretion ATPase, PEP-CTERM locus subfamily n=1 Tax=Novosphingobium sp. AP12 RepID=J2HI53_9SPHN rbh
Putative secretion ATPase, PEP-CTERM locus subfamily {ECO:0000313|EMBL:EJL35353.1}; TaxID=1144305 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphin
ATPase
scnpilot_cont_500_p_scaffold_57_95
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(98668..100698)
DNA (2031bp) protein (677aa)
Uncharacterized protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YIP4_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:GAD47987.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
hypothetical protein
scnpilot_cont_500_p_scaffold_57_96
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(100705..101805)
DNA (1101bp) protein (367aa)
CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GXX8_9SPHN
Scaffold3, whole genome shotgun sequence {ECO:0000313|EMBL:KIS33213.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
capsular biosynthesis protein
scnpilot_cont_500_p_scaffold_57_97
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(101816..103345)
DNA (1530bp) protein (510aa)
Lipopolysaccharide biosynthesis n=1 Tax=Novosphingobium pentaromativorans US6-1 RepID=G6E768_9SPHN rbh
chain-length determining protein
Lipopolysaccharide biosynthesis {ECO:0000313|EMBL:EHJ62691.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Nov
scnpilot_cont_500_p_scaffold_57_98
Novosphingobium pentaromativorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(103361..104005)
DNA (645bp) protein (215aa)
Polysaccharide export protein n=2 Tax=Novosphingobium RepID=F6INM3_9SPHN rbh
polysaccharide export protein
Polysaccharide export protein {ECO:0000313|EMBL:EHJ62692.1}; TaxID=1088721 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novos
scnpilot_cont_500_p_scaffold_57_99
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(104311..105540)
DNA (1230bp) protein (410aa)
Orn/DAP/Arg decarboxylase 2 n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5U9_NOVAD rbh
Orn/DAP/Arg decarboxylase 2 {ECO:0000313|EMBL:KHS49218.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphin
Orn/DAP/Arg decarboxylase 2
scnpilot_cont_500_p_scaffold_57_100
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105537..107105)
DNA (1569bp) protein (523aa)
AMP-binding protein n=1 Tax=Novosphingobium lindaniclasticum LE124 RepID=T0IB61_9SPHN rbh
Scaffold3, whole genome shotgun sequence {ECO:0000313|EMBL:KIS33209.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
AMP-binding protein
scnpilot_cont_500_p_scaffold_57_101
Altererythrobacter atlanticus, Altererythrobacter, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

107132..108151
DNA (1020bp) protein (340aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2GXY3_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH41721.1}; TaxID=1267766 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Erythrobacteraceae; Altererythrobacter.;" source="Alterer
hypothetical protein
scnpilot_cont_500_p_scaffold_57_102
Novosphingobium malaysiense, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108272..108535
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J3APQ8_9SPHN
Acyl carrier protein {ECO:0000313|EMBL:KHK91148.1}; TaxID=1348853 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobiu
acyl carrier protein
scnpilot_cont_500_p_scaffold_57_103
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

108590..109282
DNA (693bp) protein (231aa)
Uncharacterized protein n=1 Tax=Novosphingobium sp. AP12 RepID=J2Q591_9SPHN
Scaffold3, whole genome shotgun sequence {ECO:0000313|EMBL:KIS33564.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
hypothetical protein
scnpilot_cont_500_p_scaffold_57_104
Novosphingobium lindaniclasticum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

109282..110064
DNA (783bp) protein (261aa)
esterase n=1 Tax=Citromicrobium bathyomarinum RepID=UPI0001DD0A98
Uncharacterized protein {ECO:0000313|EMBL:EQB08936.1}; TaxID=1096930 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
esterase/lipase/thioesterase family protein
scnpilot_cont_500_p_scaffold_57_105
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(110085..111062)
DNA (978bp) protein (326aa)
Thioredoxin reductase {ECO:0000313|EMBL:GAO55421.1}; EC=1.8.1.9 {ECO:0000313|EMBL:GAO55421.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadacea
Thioredoxin reductase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5U3_NOVAD rbh
thioredoxin reductase
scnpilot_cont_500_p_scaffold_57_106
unknown

Not on your lists

111199..111978
DNA (780bp) protein (260aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_57_107
Novosphingobium aromaticivorans, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(112012..113181)
DNA (1170bp) protein (390aa)
4-hydroxybenzoate 3-monooxygenase (EC:1.14.13.2)
4-hydroxybenzoate 3-monooxygenase {ECO:0000313|EMBL:ABD26872.1}; EC=1.14.13.2 {ECO:0000313|EMBL:ABD26872.1};; Flags: Precursor;; TaxID=279238 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sp
4-hydroxybenzoate 3-monooxygenase n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5K1_NOVAD rbh
scnpilot_cont_500_p_scaffold_57_108
Novosphingobium subterraneum, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113274..114158
DNA (885bp) protein (295aa)
Transcriptional regulator, AraC family n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2G5K2_NOVAD rbh
AraC family transcriptional regulator {ECO:0000313|EMBL:KHS45562.1}; TaxID=48936 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source=
AraC family transcriptional regulator
scnpilot_cont_500_p_scaffold_57_109
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(114168..116279)
DNA (2112bp) protein (704aa)
CoA-binding protein n=1 Tax=Novosphingobium aromaticivorans (strain DSM 12444) RepID=Q2GAK2_NOVAD rbh
Uncharacterized protein {ECO:0000313|EMBL:GAO53820.1}; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingo
CoA-binding protein
scnpilot_cont_500_p_scaffold_57_110
Novosphingobium sp. MD-1, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(116305..117156)
DNA (852bp) protein (284aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:GAO53875.1}; EC=4.2.1.17 {ECO:0000313|EMBL:GAO53875.1};; TaxID=1630648 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
p-hydroxycinnamoyl CoA hydratase/lyase (EC:4.2.1.17)
crotonase n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B5604F rbh
scnpilot_cont_500_p_scaffold_57_111
Sphingobium sp. HDIP04, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117339..118085)
DNA (747bp) protein (249aa)
GntR-family transcriptional regulator n=1 Tax=Sphingobium japonicum (strain NBRC 101211 / UT26S) RepID=D4YYJ6_SPHJU
GntR family transcriptional regulator
GntR family transcriptional regulator {ECO:0000313|EMBL:EQB03781.1}; TaxID=428994 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sp
scnpilot_cont_500_p_scaffold_57_112
Sphingobium ummariense, Sphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118182..119090)
DNA (909bp) protein (303aa)
Uncharacterized protein n=1 Tax=Sphingobium ummariense RL-3 RepID=T0JAS1_9SPHN rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB33932.1}; TaxID=1346791 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingobium.;" source="Sphingobium umm
LysR family transcriptional regulator
scnpilot_cont_500_p_scaffold_57_113
Bradyrhizobium oligotrophicum, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

119204..119980
DNA (777bp) protein (259aa)
Extradiol ring-cleavage dioxygenase n=1 Tax=Bradyrhizobium oligotrophicum S58 RepID=M4Z500_9BRAD rbh
extradiol ring-cleavage dioxygenase
Extradiol ring-cleavage dioxygenase {ECO:0000313|EMBL:BAM88011.1}; TaxID=1245469 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Brady
scnpilot_cont_500_p_scaffold_57_114
R_Phenylobacterium_70_10, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120020..120604
DNA (585bp) protein (195aa)
acyl carrier protein phosphodiesterase; K01118 FMN-dependent NADH-azoreductase [EC:1.7.-.-] Tax=RIFCSPHIGHO2_01_FULL_Phenylobacterium_70_10_curated
FMN-dependent NADH-azoreductase n=1 Tax=Hyphomonas neptunium (strain ATCC 15444) RepID=AZOR_HYPNA
acyl carrier protein phosphodiesterase
scnpilot_cont_500_p_scaffold_57_115
Methylocella silvestris, Methylocella, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

120617..121225
DNA (609bp) protein (203aa)
hypothetical protein n=1 Tax=Sphingomonas sp. PR090111-T3T-6A RepID=UPI00036D0DD4
hypothetical protein
YceI family protein {ECO:0000313|EMBL:ACK52110.1}; Flags: Precursor;; TaxID=395965 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Beijerinckiaceae; Methylocella.;" source="Methyl
scnpilot_cont_500_p_scaffold_57_116
unknown

Not on your lists

comp(121303..121818)
DNA (516bp) protein (172aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_57_117
Sphingomonas taxi, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(121928..124360)
DNA (2433bp) protein (811aa)
TonB-denpendent receptor n=1 Tax=Novosphingobium sp. B-7 RepID=UPI0003B54993 rbh
Sphingomonas taxi strain 30a NODE_1, whole genome shotgun sequence {ECO:0000313|EMBL:KIU29328.1}; TaxID=1549858 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadac
TonB-dependent receptor
scnpilot_cont_500_p_scaffold_57_118
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124479..125156)
DNA (678bp) protein (226aa)
Response regulator n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZD34_9SPHN
Response regulator {ECO:0000313|EMBL:EGD57479.1}; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novosphingobium n
winged helix family two component transcriptional regulator
scnpilot_cont_500_p_scaffold_57_119
Novosphingobium nitrogenifigens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125156..126373)
DNA (1218bp) protein (406aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=983920 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae
Integral membrane sensor signal transduction histidine kinase n=1 Tax=Novosphingobium nitrogenifigens DSM 19370 RepID=F1ZD35_9SPHN rbh
sensor signal transduction histidine kinase
scnpilot_cont_500_p_scaffold_57_120
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

126468..126788
DNA (321bp) protein (107aa)
Putative uncharacterized protein (Fragment) n=1 Tax=Achromobacter xylosoxidans C54 RepID=E5U1F0_ALCXX
UDP-glucose 4-epimerase
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AKD55714.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
Displaying items 91-120 of 153 in total

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