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scnpilot_cont_500_p_scaffold_1785

Search features with annotation key words

Displaying items 31-56 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_1785_31
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27673..28467)
DNA (795bp) protein (265aa)
Diguanylate cyclase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM54_PSEUX rbh
diguanylate cyclase
Diguanylate cyclase {ECO:0000313|EMBL:AEA22737.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_1785_32
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28572..29708)
DNA (1137bp) protein (379aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudo
tRNA-dihydrouridine synthase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CM55_PSEUX rbh
nifR3 family TIM-barrel protein
scnpilot_cont_500_p_scaffold_1785_33
Saccharothrix espanaensis, Saccharothrix, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29762..30388
DNA (627bp) protein (209aa)
Uncharacterized protein n=1 Tax=Saccharothrix espanaensis (strain ATCC 51144 / DSM 44229 / JCM 9112 / NBRC 15066 / NRRL 15764) RepID=K0K382_SACES
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCH31008.1}; TaxID=1179773 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharothrix.;" source="Saccharothrix espanaensis (strai
scnpilot_cont_500_p_scaffold_1785_34
unknown

Not on your lists

30407..30727
DNA (321bp) protein (107aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1785_35
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31079..32785
DNA (1707bp) protein (569aa)
Integrase family protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH6_PSEUX rbh
integrase protein rbh
Integrase family protein {ECO:0000313|EMBL:AEA26550.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (s
scnpilot_cont_500_p_scaffold_1785_36
Frankia sp. CpI1-S, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33254..33739
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI00026271D1
Phosphotransferase family protein {ECO:0000313|EMBL:KJE25538.1}; TaxID=1502723 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. CpI1-S.;"
aminoglycoside phosphotransferase
scnpilot_cont_500_p_scaffold_1785_37
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33736..35133)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=1 Tax=Frankia sp. EUN1f RepID=D3CUJ2_9ACTO rbh
Uncharacterized protein {ECO:0000313|EMBL:EFC85722.1}; Flags: Precursor;; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_1785_38
Thermobispora bispora, Thermobispora, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35302..35664)
DNA (363bp) protein (121aa)
GntR family transcriptional regulator n=1 Tax=Salinispora arenicola RepID=UPI000374197A
GntR family transcriptional regulator
Transcriptional regulator, GntR family {ECO:0000313|EMBL:ADG86822.1}; TaxID=469371 species="Bacteria; Actinobacteria; Actinobacteria incertae sedis; Thermobispora.;" source="Thermobispora bispora (str
scnpilot_cont_500_p_scaffold_1785_39
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

35805..36044
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Actinopolyspora halophila RepID=UPI0003728CC7
excisionase
DNA binding domain protein, excisionase family {ECO:0000313|EMBL:AEA26546.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonoc
scnpilot_cont_500_p_scaffold_1785_40
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36047..36268
DNA (222bp) protein (74aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXH1_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26545.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1785_41
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

36265..36837
DNA (573bp) protein (191aa)
Transcriptional regulator WhiB n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CZE1_PSEUX
transcription factor WhiB
Transcriptional regulator WhiB {ECO:0000256|HAMAP-Rule:MF_01479}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxan
scnpilot_cont_500_p_scaffold_1785_42
unknown

Not on your lists

36838..37371
DNA (534bp) protein (178aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1785_43
Gordonia amarae, Gordonia, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37368..38216
DNA (849bp) protein (283aa)
hypothetical protein n=1 Tax=Actinopolymorpha alba RepID=UPI000381EBB8
Putative uncharacterized protein {ECO:0000313|EMBL:GAB05024.1}; TaxID=1075090 species="Bacteria; Actinobacteria; Corynebacteriales; Gordoniaceae; Gordonia.;" source="Gordonia amarae NBRC 15530.;"
phage recombinase
scnpilot_cont_500_p_scaffold_1785_44
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

38216..40024
DNA (1809bp) protein (603aa)
Type IV secretory pathway VirD4 protein-like protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXG8_PSEUX
type IV secretory pathway VirD4 protein-like protein
Type IV secretory pathway VirD4 protein-like protein {ECO:0000313|EMBL:AEA26542.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pse
scnpilot_cont_500_p_scaffold_1785_45
unknown

Not on your lists

40021..40278
DNA (258bp) protein (86aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1785_46
Mycobacterium phage Che9c, Che9clikevirus, Caudovirales, Viruses

Not on your lists

40275..41747
DNA (1473bp) protein (491aa)
DNA methyltransferase n=1 Tax=Amycolatopsis sp. ATCC 39116 RepID=UPI000262656A rbh
Gp65 {ECO:0000313|EMBL:AAN12623.1}; TaxID=205872 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae; Che9clikevirus.;" source="Mycobacterium phage Che9c.;"
C-5 cytosine-specific DNA methylase
scnpilot_cont_500_p_scaffold_1785_47
unknown

Not on your lists

41744..42139
DNA (396bp) protein (132aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1785_48
unknown

Not on your lists

42136..43227
DNA (1092bp) protein (364aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1785_49
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

43227..44066
DNA (840bp) protein (280aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CXG7_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26541.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_1785_50
Agrobacterium tumefaciens, Agrobacterium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

44063..44782
DNA (720bp) protein (240aa)
Uncharacterized protein {ECO:0000313|EMBL:EGP57356.1}; TaxID=1050720 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Rhizobium/Agrobacterium group; Agrobacterium; Ag
scnpilot_cont_500_p_scaffold_1785_51
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

45086..49945
DNA (4860bp) protein (1620aa)
TrwC relaxase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CK94_PSEUX
TrwC relaxase
TrwC relaxase {ECO:0000313|EMBL:AEA22317.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain ATCC
scnpilot_cont_500_p_scaffold_1785_52
unknown

Not on your lists

comp(49980..50291)
DNA (312bp) protein (104aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1785_53
unknown

Not on your lists

50510..51208
DNA (699bp) protein (233aa)
hypothetical protein n=1 Tax=Nocardiopsis potens RepID=UPI00034B6F64
scnpilot_cont_500_p_scaffold_1785_54
unknown

Not on your lists

comp(51198..52328)
DNA (1131bp) protein (377aa)

This feature has no annotations

scnpilot_cont_500_p_scaffold_1785_55
Frankia sp. EUN1f, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(52416..53075)
DNA (660bp) protein (220aa)
Uncharacterized protein n=1 Tax=Frankia sp. EUN1f RepID=D3CRV1_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EFC86583.1}; TaxID=102897 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. EUN1f.;"
scnpilot_cont_500_p_scaffold_1785_56
unknown

Not on your lists

comp(53145..53429)
DNA (285bp) protein (95aa)

This feature has no annotations

Displaying items 31-56 of 56 in total

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