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scnpilot_cont_500_p_scaffold_813

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_cont_500_p_scaffold_813_1
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..585)
DNA (585bp) protein (195aa)
L-arabinose isomerase {ECO:0000256|SAAS:SAAS00093763}; EC=5.3.1.4 {ECO:0000256|SAAS:SAAS00093763};; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" s
Putative L-arabinose isomerase protein n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PT71_KRIFD
putative L-arabinose isomerase protein
scnpilot_cont_500_p_scaffold_813_2
Micromonospora carbonacea, Micromonospora, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(653..2689)
DNA (2037bp) protein (679aa)
Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase n=1 Tax=Frankia sp. CN3 RepID=G6HE65_9ACTO rbh
Micromonospora carbonacea strain JXNU-1 contig3, whole genome shotgun sequence {ECO:0000313|EMBL:KIR61443.1}; TaxID=47853 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Micr
rhaD; rhamnulose-1-phosphate aldolase rbh
scnpilot_cont_500_p_scaffold_813_3
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2771..3931)
DNA (1161bp) protein (387aa)
L-rhamnose isomerase-like protein n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1G3J6_9PSEU rbh
L-rhamnose isomerase-like protein {ECO:0000313|EMBL:EOD66058.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancores
L-rhamnose isomerase rbh
scnpilot_cont_500_p_scaffold_813_4
Amycolatopsis rifamycinica, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3928..4266)
DNA (339bp) protein (113aa)
L-rhamnose mutarotase n=1 Tax=Kribbella catacumbae RepID=UPI00037EC313
hypothetical protein
L-rhamnose mutarotase {ECO:0000313|EMBL:KDN17429.1}; TaxID=287986 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis rifamycinica.;"
scnpilot_cont_500_p_scaffold_813_5
Actinoplanes friuliensis, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4288..5361)
DNA (1074bp) protein (358aa)
Rhamnose ABC transporter periplasmic rhamnose-binding protein n=1 Tax=Actinoplanes friuliensis DSM 7358 RepID=U5VQ50_9ACTO rbh
rhamnose ABC transporter periplasmic rhamnose-binding protein
Rhamnose ABC transporter periplasmic rhamnose-binding protein {ECO:0000313|EMBL:AGZ38939.1}; TaxID=1246995 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" sou
scnpilot_cont_500_p_scaffold_813_6
Amycolatopsis vancoresmycina, Amycolatopsis, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5373..6425)
DNA (1053bp) protein (351aa)
Sugar ABC transporter permease n=1 Tax=Amycolatopsis vancoresmycina DSM 44592 RepID=R1HR84_9PSEU rbh
Sugar ABC transporter permease {ECO:0000313|EMBL:EOD66055.1}; TaxID=1292037 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Amycolatopsis.;" source="Amycolatopsis vancoresmyc
rhaQ; sugar ABC transporter permease rbh
scnpilot_cont_500_p_scaffold_813_7
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6418..7419)
DNA (1002bp) protein (334aa)
Inner-membrane translocator n=1 Tax=Kribbella flavida (strain DSM 17836 / JCM 10339 / NBRC 14399) RepID=D2PT65_KRIFD rbh
inner-membrane translocator rbh
Inner-membrane translocator {ECO:0000313|EMBL:ADB29381.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (strain DSM 1783
scnpilot_cont_500_p_scaffold_813_8
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7505..8470)
DNA (966bp) protein (322aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioi
Monosaccharide-transporting ATPase n=1 Tax=Frankia sp. CN3 RepID=G6HE72_9ACTO
ABC transporter
scnpilot_cont_500_p_scaffold_813_9
Streptomyces pristinaespiralis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8434..9000)
DNA (567bp) protein (189aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=457429 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycet
Ribose import ATP-binding protein rbsA 2 n=1 Tax=Streptomyces pristinaespiralis ATCC 25486 RepID=B5H7C6_STRPR
rbsA; sugar ABC transporter ATPase
scnpilot_cont_500_p_scaffold_813_10
Kribbella flavida, Kribbella, Propionibacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9126..10145
DNA (1020bp) protein (340aa)
LacI family transcription regulator n=1 Tax=Kribbella catacumbae RepID=UPI00036ACD44 rbh
LacI family transcriptional regulator
Transcriptional regulator, LacI family {ECO:0000313|EMBL:ADB29379.1}; TaxID=479435 species="Bacteria; Actinobacteria; Propionibacteriales; Nocardioidaceae; Kribbella.;" source="Kribbella flavida (stra
scnpilot_cont_500_p_scaffold_813_11
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10212..10901)
DNA (690bp) protein (230aa)
GntR domain protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRI6_PSEUX
GntR family transcriptional regulator
GntR domain protein {ECO:0000313|EMBL:AEA26194.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (strain
scnpilot_cont_500_p_scaffold_813_12
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10938..11663
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRI7_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA26195.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_813_13
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11737..13200
DNA (1464bp) protein (488aa)
Iron-sulfur cluster binding protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRI8_PSEUX rbh
iron-sulfur cluster binding protein
Iron-sulfur cluster binding protein {ECO:0000313|EMBL:AEA26196.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxa
scnpilot_cont_500_p_scaffold_813_14
Frankia sp. QA3, Frankia, Frankiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13556..14167
DNA (612bp) protein (204aa)
Uncharacterized protein n=1 Tax=Frankia sp. QA3 RepID=I9KCS7_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:EIV91785.1}; TaxID=710111 species="Bacteria; Actinobacteria; Frankiales; Frankiaceae; Frankia.;" source="Frankia sp. QA3.;"
hypothetical protein
scnpilot_cont_500_p_scaffold_813_15
Saccharopolyspora rectivirgula, Saccharopolyspora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14145..14414)
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Saccharopolyspora spinosa RepID=UPI000237AACB
Uncharacterized protein {ECO:0000313|EMBL:KEI43504.1}; TaxID=28042 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharopolyspora.;" source="Saccharopolyspora rectivirgula
scnpilot_cont_500_p_scaffold_813_16
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14396..14650)
DNA (255bp) protein (85aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRC3_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25214.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_813_17
Mycobacterium aromaticivorans, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14803..15576
DNA (774bp) protein (258aa)
Uncharacterized protein n=1 Tax=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) RepID=B1W5L3_STRGG
Uncharacterized protein {ECO:0000313|EMBL:KDE96772.1}; TaxID=1440774 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium.;" source="Mycobacterium aromaticivorans JS19
NB-ARC domain-containing protein
scnpilot_cont_500_p_scaffold_813_18
Rhodococcus opacus, Rhodococcus, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15603..16352)
DNA (750bp) protein (250aa)
ABC transporter, ATP-binding component n=1 Tax=Rhodococcus sp. (strain RHA1) RepID=Q0SGC3_RHOSR rbh
ABC transporter {ECO:0000313|EMBL:AII09546.1}; TaxID=37919 species="Bacteria; Actinobacteria; Corynebacteriales; Nocardiaceae; Rhodococcus.;" source="Rhodococcus opacus (Nocardia opaca).;"
ABC transporter ATP-binding protein rbh
scnpilot_cont_500_p_scaffold_813_19
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16345..17205)
DNA (861bp) protein (287aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRC1_PSEUX rbh
ABC transporter permease
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA25212.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono
scnpilot_cont_500_p_scaffold_813_20
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17202..18215)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRC0_PSEUX rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25211.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardi
scnpilot_cont_500_p_scaffold_813_21
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18332..19063)
DNA (732bp) protein (244aa)
3-oxoacyl-ACP reductase (EC:1.1.1.100)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEA23718.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEA23718.1};; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardia
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CSK8_PSEUX rbh
scnpilot_cont_500_p_scaffold_813_22
Streptomyces auratus, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19198..19734
DNA (537bp) protein (179aa)
hypothetical protein n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFDDD0
Uncharacterized protein {ECO:0000313|EMBL:EJJ03328.1}; TaxID=1160718 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces auratus AGR0001.;"
putative secreted protein
scnpilot_cont_500_p_scaffold_813_23
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20248..21441)
DNA (1194bp) protein (398aa)
glucokinase (EC:2.7.1.2)
Glucokinase {ECO:0000313|EMBL:AEA25198.1}; EC=2.7.1.2 {ECO:0000313|EMBL:AEA25198.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="P
Glucokinase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRA7_PSEUX rbh
scnpilot_cont_500_p_scaffold_813_24
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21438..22883)
DNA (1446bp) protein (482aa)
ABC-type transporter, integral membrane subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRA6_PSEUX rbh
ABC transporter permease
ABC-type transporter, integral membrane subunit {ECO:0000313|EMBL:AEA25197.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudono
scnpilot_cont_500_p_scaffold_813_25
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22918..23691)
DNA (774bp) protein (258aa)
monosaccharide-transporting ATPase (EC:3.6.3.17)
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AEA25196.1}; EC=3.6.3.17 {ECO:0000313|EMBL:AEA25196.1};; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pse
Monosaccharide-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRA5_PSEUX rbh
scnpilot_cont_500_p_scaffold_813_26
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(23761..24882)
DNA (1122bp) protein (374aa)
Monosaccharide-transporting ATPase n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRA4_PSEUX rbh
monosaccharide-transporting ATPase
Monosaccharide-transporting ATPase {ECO:0000313|EMBL:AEA25195.1}; Flags: Precursor;; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Ps
scnpilot_cont_500_p_scaffold_813_27
Actinoplanes sp. SE50/110, Actinoplanes, Micromonosporales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25173..26099
DNA (927bp) protein (309aa)
polyphosphate kinase n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE3B4 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEV81854.1}; TaxID=134676 species="Bacteria; Actinobacteria; Micromonosporales; Micromonosporaceae; Actinoplanes.;" source="Actinoplanes sp. (strain ATCC 3104
scnpilot_cont_500_p_scaffold_813_28
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26194..27069)
DNA (876bp) protein (292aa)
DMT transporter permease n=1 Tax=Pseudonocardia sp. P1 RepID=UPI0001FFE444 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25194.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_813_29
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27354..27530
DNA (177bp) protein (59aa)
Uncharacterized protein n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRA2_PSEUX
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEA25193.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia dioxanivorans (st
scnpilot_cont_500_p_scaffold_813_30
Pseudonocardia dioxanivorans, Pseudonocardia, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(28171..29886)
DNA (1716bp) protein (572aa)
Type III restriction protein res subunit n=1 Tax=Pseudonocardia dioxanivorans (strain ATCC 55486 / DSM 44775 / JCM 13855 / CB1190) RepID=F4CRA0_PSEUX rbh
type III restriction protein res subunit
Type III restriction protein res subunit {ECO:0000313|EMBL:AEA25191.1}; TaxID=675635 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Pseudonocardia.;" source="Pseudonocardia
Displaying items 1-30 of 44 in total

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