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scnpilot_p_inoc_scaffold_6360_9

Organism: SCN_pilot_inoc_UNK

megabin RP 53 / 55 MC: 52 BSCG 51 / 51 MC: 51 ASCG 24 / 38 MC: 19
Location: comp(5580..6038)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator AzlB n=1 Tax=Shinella zoogloeoides DD12 RepID=V5CYK0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 96.1
  • Coverage: 152.0
  • Bit_score: 285
  • Evalue 3.00e-74
Transcriptional regulator AzlB {ECO:0000313|EMBL:EYR84143.1}; TaxID=1410620 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhizobiaceae; Shinella.;" source="Shinella sp. DD12.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.1
  • Coverage: 152.0
  • Bit_score: 285
  • Evalue 4.20e-74
dadR; alanine catabolic operon transcriptional regulator protein similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 152.0
  • Bit_score: 247
  • Evalue 3.30e-63

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Taxonomy

Shinella sp. DD12 → Shinella → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 459
ATGCGACTGGACGAGACAGACCGCCGCATCCTGCGCGAGCTGCAGCAGAATGGCCGGTTGCAGAATATCGAACTGGCAAAACGTGTCGGCCTTTCGCCTTCGCCCTGCCTGCGGCGCGTGAAGCTGCTGGAAGAGGCCGGCATCATCAGCCGCTATGTGGCGATCGTCGATCAGGCCAGGGTCGGCCTCACGCTCTCAATGTTCGCCCGCGTCTCGCTGACCGCACAGGATGCGGAAACGATCGATCACTTCATCGCGGCGATGAAGCGGCTTCCCGAGGTGGTGGAGTGCTACATCATGCTCGGCGAGAGCGACGCGCTGCTGCGCGTCGTCGTCTCGGATCTGGAAGACTATCGCCGCTTCCAGTCGACCCATCTCACCCGCAAGAACGGCATACAGACCGTCAAGACGGATGTGCCGAGCGAGACGATCAAGCAGAGTTTCGCGCTTCCCCTGTAG
PROTEIN sequence
Length: 153
MRLDETDRRILRELQQNGRLQNIELAKRVGLSPSPCLRRVKLLEEAGIISRYVAIVDQARVGLTLSMFARVSLTAQDAETIDHFIAAMKRLPEVVECYIMLGESDALLRVVVSDLEDYRRFQSTHLTRKNGIQTVKTDVPSETIKQSFALPL*