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scnpilot_p_inoc_scaffold_274_112

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 110225..110515

Top 3 Functional Annotations

Value Algorithm Source
Uncharacterized protein n=1 Tax=Oceanicola batsensis HTCC2597 RepID=A3TZH9_9RHOB similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 96.0
  • Bit_score: 181
  • Evalue 5.10e-43
VIRB2 type IV secretion {ECO:0000313|EMBL:KGM47018.1}; TaxID=1461694 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Oceanicola.;" source="Oceanicola sp. 22I similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 96.0
  • Bit_score: 181
  • Evalue 7.10e-43
conjugal transfer protein TrbC similarity KEGG
DB: KEGG
  • Identity: 83.3
  • Coverage: 96.0
  • Bit_score: 153
  • Evalue 3.20e-35

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Taxonomy

Pseudooceanicola atlanticus → Pseudooceanicola → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 291
ATGAAGCCATTGACGAAATCCCTGATCACCCTTGCCGCTCTCCTCATCGTTGCGGCAGAACCGGCCCTGGCCCAGAGCATCGACCTCTCACCGATTCAGAGCTTGCTTCAGGGCATCGTGGACGCGCTGACCGGACCGCTTGGAGTCGTCATCGCCACCCTCGCGGTCCTCGGCGTGTTCCTCAGCTGGTTCTTCAACATCATCGATCTGCGCCAAGCCCTCTGGGTGCTGGTGGGCATCGCGGGTGTTGCGGCCGCGCCGACCATCGTTGCCGCCGTCTTCGGGTCGTGA
PROTEIN sequence
Length: 97
MKPLTKSLITLAALLIVAAEPALAQSIDLSPIQSLLQGIVDALTGPLGVVIATLAVLGVFLSWFFNIIDLRQALWVLVGIAGVAAAPTIVAAVFGS*