ggKbase home page

scnpilot_p_inoc_scaffold_1355_12

Organism: SCNpilot_P_inoc_Rhodobacter_64_50

near complete RP 52 / 55 MC: 2 BSCG 51 / 51 ASCG 11 / 38
Location: 6535..7233

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L1 id=3043627 bin=GWF1_Rhodobacteraceae_65_7 species=unknown genus=Rhodobacter taxon_order=Rhodobacterales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF1_Rhodobacteraceae_65_7 organism_group=Alphaproteobacteria organism_desc=Good + similarity UNIREF
DB: UNIREF100
  • Identity: 93.1
  • Coverage: 233.0
  • Bit_score: 425
  • Evalue 4.90e-116
  • rbh
rplA; 50S ribosomal protein L1; K02863 large subunit ribosomal protein L1 Tax=GWF1_Rhodobacteraceae_65_7_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 93.1
  • Coverage: 232.0
  • Bit_score: 425
  • Evalue 6.80e-116
rplA; 50S ribosomal protein L1 similarity KEGG
DB: KEGG
  • Identity: 89.7
  • Coverage: 232.0
  • Bit_score: 412
  • Evalue 9.20e-113

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

GWF1_Rhodobacteraceae_65_7_curated → Rhodobacterales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGGCGAAACTCGGTAAACGTACCAAAGCCGCCCGCGAAGCTTTCGTTGGCAAGGAACTGGTCTCGGTTGAGGATGCGGTGAAGCTGATCAAGTCGGCTGCCACGGCGAAATTCGACGAAACCCTTGAAATCGCGATGAACCTCGGTGTTGACCCGCGTCACGCTGACCAGATGGTTCGTGGTGTTGTCCAGCTCCCGAACGGGACCGGCAAGACCGTGCGCGTGGCGGTGTTCGCCCGTGGCGCCAAGGCTGATGAAGCCAAGGCCGCCGGTGCCGACATCGTGGGCGCCGAAGACCTGATGGAAACCATCCAGTCGGGCAAGATCGAATTTGATCGCTGCATCGCCACCCCGGACATGATGCCGCTGGTCGGCCGTCTGGGTAAGATCCTTGGCCCGCGCAACCTGATGCCGAACCCGAAAGTCGGCACCGTGACGATGGACGTGAAAACGGCTGTCGAAGCGGCGAAGGGCGGCGAAGTCCAGTTCAAGGTCGAAAAGGCCGGTGTGATCCATGCCGGTATCGGCAAGGTCTCGTTCGAGGACGGCAAGCTGTCCGAAAACGTCCGCGCTTTCGTTGACGCCGTGACCCGCGCCAAACCGGCAGGGGCCAAAGGCACCTATGTGAAGAAGGTTTCGCTGTCCTCGACCATGGGTCCGGGCGTGTCGATCGACCTCGCTTCGGCTTCGGGCAACTGA
PROTEIN sequence
Length: 233
MAKLGKRTKAAREAFVGKELVSVEDAVKLIKSAATAKFDETLEIAMNLGVDPRHADQMVRGVVQLPNGTGKTVRVAVFARGAKADEAKAAGADIVGAEDLMETIQSGKIEFDRCIATPDMMPLVGRLGKILGPRNLMPNPKVGTVTMDVKTAVEAAKGGEVQFKVEKAGVIHAGIGKVSFEDGKLSENVRAFVDAVTRAKPAGAKGTYVKKVSLSSTMGPGVSIDLASASGN*