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scnpilot_p_inoc_scaffold_44_18

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: 7370..7897

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L6 n=1 Tax=Rhodanobacter sp. 115 RepID=I4WNK3_9GAMM similarity UNIREF
DB: UNIREF100
  • Identity: 74.3
  • Coverage: 175.0
  • Bit_score: 262
  • Evalue 3.20e-67
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1162282 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Rhod similarity UNIPROT
DB: UniProtKB
  • Identity: 74.3
  • Coverage: 175.0
  • Bit_score: 262
  • Evalue 4.40e-67
LSU ribosomal protein L6P similarity KEGG
DB: KEGG
  • Identity: 73.7
  • Coverage: 175.0
  • Bit_score: 257
  • Evalue 3.70e-66

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Taxonomy

Rhodanobacter sp. 115 → Rhodanobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 528
ATGTCCCGCGTAGCAAAACTGCCGATCGCCCTGCCGAAGGGCGTCGAATGCCAGGTGGCCGCCGACGGCGTCACCGTCAAGGGCCCCAAGGGCGCGCTGAAGTCGGTCGCCTTCCCGGGCGTCGAGATCGCCGTCAACAGCGGTGAGCTGACCTGCAAGCCCGTCGCGATCGCCGACGACAAGCTGGCCGGTACGGCGCGCGCCGTGCTGAACAACATGGTGAAGGGTGTCAGCGAAGGCTATGTCCGCAAGCTCGAACTCGTCGGCGTCGGTTACCGCGCCGCGATGCAGGGCAAGGATCTGAGCCTGACGCTCGGCTTCTCGCACCCGGTCCTGTTCCAGGCGCCGGAAGGCGTCACGATGGAAACGCCGAGCCAGACCGAAATCCTGATCAAGGGTGCGGACAAGCAGGCTGTCGGCCAGGCTGCCGCCAAGATTCGCGGTTTCCGTCCGCCGGAACCCTACAAGGGCAAGGGCGTGCGTTATTCCGGCGAGAAGATCACCCTGAAGGAAGCCAAGAAGGCCTAA
PROTEIN sequence
Length: 176
MSRVAKLPIALPKGVECQVAADGVTVKGPKGALKSVAFPGVEIAVNSGELTCKPVAIADDKLAGTARAVLNNMVKGVSEGYVRKLELVGVGYRAAMQGKDLSLTLGFSHPVLFQAPEGVTMETPSQTEILIKGADKQAVGQAAAKIRGFRPPEPYKGKGVRYSGEKITLKEAKKA*