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scnpilot_p_inoc_scaffold_258_103

Organism: SCNpilot_P_inoc_Xanthomonadales_65_40

near complete RP 52 / 55 BSCG 51 / 51 ASCG 13 / 38
Location: comp(112871..114187)

Top 3 Functional Annotations

Value Algorithm Source
Two-component response regulator {ECO:0000313|EMBL:KGQ18200.1}; TaxID=1300345 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lysobacte similarity UNIPROT
DB: UniProtKB
  • Identity: 47.2
  • Coverage: 441.0
  • Bit_score: 367
  • Evalue 3.20e-98
Sigma 54-dependent transcriptional activator containing CheY-like receiver domain id=2521426 bin=GWF1_Xanthomonadales_69_6 species=Hahella chejuensis genus=Hahella taxon_order=Oceanospirillales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWF1_Xanthomonadales_69_6 organism_group=Gammaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 45.1
  • Coverage: 437.0
  • Bit_score: 341
  • Evalue 1.00e-90
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 446.0
  • Bit_score: 300
  • Evalue 7.40e-79

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Taxonomy

Lysobacter dokdonensis → Lysobacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1317
ATGCTGCGATACGGCGAGTCGGGGCTTTACATGGAATCACCTGCAAATCCGTCGTTGCTCATCGTTGACGACGACGTCAGTTTCGCGCGTGCCGCTGCCGAAATCGCCCGTACCATCCCGTATGACATCACCCTTGCCGACGGTGTGCGCCAGGCCGAGCTGCGGCTCAGCCGCGGCCGGTTCGATCTGGTCCTGATCGACCTGGTCCTGCCCGACGGCTCGGGCCTGGACCTGGTGCCCTCATGCACGCGGCAGGCGGCCGACGTGGTACTGGTCACCGGTCATCCGAGCATCGAGTCGGCGGTGACGGCCTGCCGCACCTCGCTGCTGGACTATCTGATCAAGCCGATCGACCCGGCGCGCTACCGCGATCTGCTCGACCGCACGGCGCGGCGGCGACGGTTGCCGCCGCCCGTGCCGGGCGGCGGCCGGTATGGACTGGTCGGCCGCTCCGCCGCGCTGCAGCGGCTGACCCTGCAGGTCGAACGCGTCGCGCCCACCGAGGCCTCGGTGCTGATCCACGGCGAAAGCGGCGTCGGCAAGCGGCTGACGGCGCAGGCCATCCATGCGGCCAGCGGCCGCCGCGGCCCGTTCCTGTCGGTGTGCTGCGCCGACGCCACGGCCGAGCGCCTGAGCACGCTGCTGTCGGATGCGGTACTCCACGCGGCGGCGCTGCCCGGTGCCGGCGGCACCGTGTTTCTCGACGAAATCACCGAACTCGCGCCGGCACTGCAGATCCAGCTGCTGCGCGCGCTGGAGAATCAGGTGCCGGAGCGCCGCAACCTGCGCATCGTCGCGGCCACGGTCCACGCCGGCGACCGCAGCGTCAGCGAGGGCGGACTGCGCGAAGATCTCTATTACCGCCTCGGCGAGTTCACGATCGCGATTGCGCCGCTGCGCGAACGTGCGGACGACATCGCCGCGCTGGCCGGCCACTTCCTGGCCGAACTCAACGAACGCCACGTCACGCGCAAGGCCTTCACCGGGCTCGCGCTGGAACAGCTGCACCGCTTCTCCTGGCCCGGCAACGTGCGCGAACTGCGCAACGTCATCGGCCATGCCTATCTGATGGCCAGCGGCGAGACGATCAACGATCCGATGGGGCTGGTACGCGTGACCCAGCCGCTGCGCGAAACGCCGGGCTCGCTGACCGTCGCGGTCGGCACCACGCTCGAGGAAGTCGAACGGCGCATGCTCATGAAGACGCTGGAGTTCTTCGGCAACGACAAGACCAAGGCCGCACGCGCGCTCGGGGTCAGCGTGAAGACGATCTACAACCACCTGGCCAAGCACCAGAATCCGGCCGAGTCCGGCTGA
PROTEIN sequence
Length: 439
MLRYGESGLYMESPANPSLLIVDDDVSFARAAAEIARTIPYDITLADGVRQAELRLSRGRFDLVLIDLVLPDGSGLDLVPSCTRQAADVVLVTGHPSIESAVTACRTSLLDYLIKPIDPARYRDLLDRTARRRRLPPPVPGGGRYGLVGRSAALQRLTLQVERVAPTEASVLIHGESGVGKRLTAQAIHAASGRRGPFLSVCCADATAERLSTLLSDAVLHAAALPGAGGTVFLDEITELAPALQIQLLRALENQVPERRNLRIVAATVHAGDRSVSEGGLREDLYYRLGEFTIAIAPLRERADDIAALAGHFLAELNERHVTRKAFTGLALEQLHRFSWPGNVRELRNVIGHAYLMASGETINDPMGLVRVTQPLRETPGSLTVAVGTTLEEVERRMLMKTLEFFGNDKTKAARALGVSVKTIYNHLAKHQNPAESG*