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RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019

Search features with annotation key words

Displaying items 1-30 of 40 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_1
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists


3..434
-----------------
DNA (432bp)
protein (144aa)
alaS; Alanine--tRNA ligase (EC:6.1.1.7) Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
hypothetical protein id=5801913 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_2
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

436..825
-----------------
DNA (390bp)
protein (130aa)
hypothetical protein n=1 Tax=Echinicola pacifica RepID=UPI00037A8366
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_3
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

822..1622
-----------------
DNA (801bp)
protein (267aa)
glucose-6-phosphate isomerase (EC:5.3.1.9); K06859 glucose-6-phosphate isomerase, archaeal [EC:5.3.1.9] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
glucose-6-phosphate isomerase, archaeal (EC:5.3.1.9)
Glucose-6-phosphate isomerase n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GGH8_9FIRM
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_4
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

1639..3237
-----------------
DNA (1599bp)
protein (533aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZZM3_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_5
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

3241..4254
-----------------
DNA (1014bp)
protein (338aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_6
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

4345..4545
-----------------
DNA (201bp)
protein (67aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_7
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists


5033..5428
-----------------
DNA (396bp)
protein (132aa)
30S ribosomal protein S13 n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00038172C2
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
rpsM; 30S ribosomal protein S13
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_8
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists


5447..5884
-----------------
DNA (438bp)
protein (146aa)
30S ribosomal protein S11 n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C2N1_SPHTD
30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
30S ribosomal protein S11
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_9
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists


5987..6595
-----------------
DNA (609bp)
protein (203aa)
30S ribosomal protein S4 n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WTU6_ALIAD
rpsD; 30S ribosomal protein S4; K02986 small subunit ribosomal protein S4 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
rpsD; 30S ribosomal protein S4
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_10
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

6623..7552
-----------------
DNA (930bp)
protein (310aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
DNA-directed RNA polymerase, alpha subunit; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=96114 bin=ACD63 species=ACD63 genus=ACD63 taxon_order=ACD63 taxon_class=ACD63 phylum=OD1 tax=ACD63 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_11
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists


7561..7935
-----------------
DNA (375bp)
protein (125aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA036-E14 RepID=UPI00036FABF8
50S ribosomal protein L17; K02879 large subunit ribosomal protein L17 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
50S ribosomal protein L17
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_12
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists


7947..8366
-----------------
DNA (420bp)
protein (140aa)
50S ribosomal protein L13 n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8V2Y3_9AQUI
rplM; 50S ribosomal protein L13; K02871 large subunit ribosomal protein L13 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
rplM; 50S ribosomal protein L13
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_13
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists


8376..8945
-----------------
DNA (570bp)
protein (190aa)
30S ribosomal protein S9 n=1 Tax=Parcubacteria bacterium SCGC AAA010-E09 RepID=UPI00035CD22E
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
30S ribosomal protein S9
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_14
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(9121..9399)
-----------------
DNA (279bp)
protein (93aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_15
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(9396..10004)
-----------------
DNA (609bp)
protein (203aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_16
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

10089..10640
-----------------
DNA (552bp)
protein (184aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_17
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(10765..11112)
-----------------
DNA (348bp)
protein (116aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_18
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

11209..11892
-----------------
DNA (684bp)
protein (228aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_19
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

11944..12207
-----------------
DNA (264bp)
protein (88aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
hypothetical protein id=8312 bin=ACD15 species=ACD15 genus=ACD15 taxon_order=ACD15 taxon_class=ACD15 phylum=OD1-i tax=ACD15 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_20
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

comp(12320..14149)
-----------------
DNA (1830bp)
protein (610aa)
GTP-binding protein TypA n=2 Tax=Bacteria RepID=D8P868_9BACT
typA; GTP-binding protein TypA; K06207 GTP-binding protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
typA; GTP-binding protein TypA
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_21
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

14871..15203
-----------------
DNA (333bp)
protein (111aa)
putative RNA-binding protein RbpA Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
putative RNA-binding protein RbpA id=15190099 bin=GWB1_SUB10_ACD81 species=GWE2_OD1_ACD81_47_12 genus=GWE2_OD1_ACD81_47_12 taxon_order=GWE2_OD1_ACD81_47_12 taxon_class=GWE2_OD1_ACD81_47_12 phylum=OD1 tax=GWB1_SUB10_ACD81 organism_group=OD1 (Parcubacteria) organism_desc=Complete
putative RNA-binding protein RbpA
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_22
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

15320..16741
-----------------
DNA (1422bp)
protein (474aa)
UDP-phosphate glucose phosphotransferase (EC:2.7.8.-) Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
undecaprenyl-phosphate glucose phosphotransferase (EC:2.7.8.-) id=16890 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
UDP-phosphate glucose phosphotransferase (EC:2.7.8.-)
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_23
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

16744..17415
-----------------
DNA (672bp)
protein (224aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_24
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

17412..18503
-----------------
DNA (1092bp)
protein (364aa)
glycosyl transferase group 1 Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
thx:Thet_0654 glycosyl transferase group 1 id=86895 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
glycosyl transferase group 1
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_25
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

18566..19057
-----------------
DNA (492bp)
protein (164aa)
Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_26
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

19101..20219
-----------------
DNA (1119bp)
protein (373aa)
Mannosyltransferase B-like protein n=1 Tax=uncultured bacterium RepID=K2AQ96_9BACT
group 1 glycosyl transferase Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
group 1 glycosyl transferase
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_27
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

20216..21295
-----------------
DNA (1080bp)
protein (360aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227); K02563 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-UDP N-acetylglucosamine transferase (EC:2.4.1.227)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase id=2733804 bin=GWC2_OP3-like_45_7 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_28
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

21292..22254
-----------------
DNA (963bp)
protein (321aa)
PadR family transcriptional regulator n=1 Tax=Bacillus sp. 1NLA3E RepID=N0AY70_9BACI
PadR family transcriptional regulator Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
PadR family transcriptional regulator
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_29
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

22251..23648
-----------------
DNA (1398bp)
protein (466aa)
murC; UDP-N-acetylmuramate--L-alanine ligase; K01924 UDP-N-acetylmuramate--alanine ligase [EC:6.3.2.8] Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
UDP-N-acetylmuramate--L-alanine ligase id=1930745 bin=GWE2_OD1_46_68 species=GWE2_OD1_46_68 genus=GWE2_OD1_46_68 taxon_order=GWE2_OD1_46_68 taxon_class=GWE2_OD1_46_68 phylum=OD1 tax=GWE2_OD1_46_68 organism_group=OD1 (Parcubacteria)
murC; UDP-N-acetylmuramate--L-alanine ligase
RIFCSPHIGHO2_01_FULL_OD1_50_67_rifcsphigho2_01_scaffold_2019_30
RHI_SM2F11_48_16, SM2F11, Bacteria

Not on your lists

23783..24478
-----------------
DNA (696bp)
protein (232aa)
hypothetical protein n=1 Tax=SAR202 cluster bacterium SCGC AAA240-N13 RepID=UPI00035EF1AA
ABC transporter permease; K09686 antibiotic transport system permease protein Tax=RIFCSPHIGHO2_12_FULL_SM2F11_48_16_curated
ABC transporter permease
Displaying items 1-30 of 40 in total

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