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RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_1

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3..173
-----------------
DNA (171bp)
protein (57aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037089BB
Helix-turn-helix domain protein {ECO:0000313|EMBL:KKR60546.1}; TaxID=1618924 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_40_31.;"
helix-turn-helix domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_2
R_OD1_Uhrbacteria_53_13, Uhrbacteria, Parcubacteria, Bacteria

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179..781
-----------------
DNA (603bp)
protein (201aa)
Putative uncharacterized protein n=1 Tax=Jonquetella anthropi E3_33 E1 RepID=C9M725_9BACT id=31708 bin=ACD28 species=Jonquetella anthropi genus=Jonquetella taxon_order=Synergistales taxon_class=Synergistia phylum=Synergistetes tax=ACD28 organism_group=PER (Peregrinibacteria) organism_desc=PER
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Uhrbacteria_53_13_curated
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_3
Synergistes sp. 3_1_syn1, Synergistes, Synergistales, Synergistia, Synergistetes, Bacteria

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787..3048
-----------------
DNA (2262bp)
protein (754aa)
Putative uncharacterized protein n=1 Tax=Synergistes sp. 3_1_syn1 RepID=G9PTB9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHL69856.1}; TaxID=457415 species="Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Synergistes.;" source="Synergistes sp. 3_1_syn1.;"
restriction endonuclease
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_4
RLO_OD1_Jorgensenbacteria_42_11, Jorgensenbacteria, Parcubacteria, Bacteria

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comp(3079..3960)
-----------------
DNA (882bp)
protein (294aa)
Tax=RIFCSPLOWO2_12_FULL_OD1_Jorgensenbacteria_42_11_curated
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_5
R_RIF_OD1_12_44_230, RIF-OD1-12, Parcubacteria, Bacteria

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4020..5462
-----------------
DNA (1443bp)
protein (481aa)
DNA methylase N-4/N-6 domain-containing protein; K07319 putative adenine-specific DNA-methyltransferase [EC:2.1.1.72] Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_12_44_230_curated
putative Modification methylase BamHII (N-4 cytosine-specific methyltransferase BamHII) (M,BamHII) (EC:2.1.1.72)
Putative Modification methylase BamHII (N-4 cytosine-specific methyltransferase BamHII) (M,BamHII) n=1 Tax=Methanobacterium sp. MB1 RepID=U6EF88_9EURY
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_6

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comp(5471..6511)
-----------------
DNA (1041bp)
protein (347aa)
Uncharacterized protein n=1 Tax=Methanobacterium sp. MB1 RepID=U6EDA7_9EURY
Uncharacterized protein {ECO:0000313|EMBL:KKS37640.1}; TaxID=1618820 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_42_14.;"
hypothetical protein
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_7
R_OP11_Woesebacteria_39_10, Woesebacteria, Microgenomates, Bacteria

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6704..7645
-----------------
DNA (942bp)
protein (314aa)
Ppx/GppA phosphatase; K01524 exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [EC:3.6.1.11 3.6.1.40] Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_10_curated
Ppx/GppA phosphatase n=4 Tax=Hydrogenobaculum RepID=M1RIE2_9AQUI
exopolyphosphatase
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_8
R_OP11_Daviesbacteria_40_11, Daviesbacteria, Microgenomates, Bacteria

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7645..8235
-----------------
DNA (591bp)
protein (197aa)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Daviesbacteria_40_11_curated
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_9
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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8273..9208
-----------------
DNA (936bp)
protein (312aa)
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] id=35281 bin=ACD2 species=ACD2 genus=ACD2 taxon_order=ACD2 taxon_class=ACD2 phylum=BD1-5 tax=ACD2 organism_group=BD1-5 (Gracilibacteria) organism_desc=BD1-5
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase {ECO:0000313|EMBL:KKU52245.1}; Flags: Fragment;; TaxID=1618840 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_10b.;"
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_10
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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9238..9486
-----------------
DNA (249bp)
protein (83aa)
GIY-YIG protein n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7Q0B4_9BACT
Endo/excinuclease domain protein Tax=GWA2_OD1_47_10b
endo/excinuclease domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_11
unknown

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comp(9473..9841)
-----------------
DNA (369bp)
protein (123aa)

This feature has no annotations

RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_12
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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comp(10016..10339)
-----------------
DNA (324bp)
protein (108aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_13
GWB1_OD1_47_6, Giovannonibacteria, Parcubacteria, Bacteria

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10538..17158
-----------------
DNA (6621bp)
protein (2207aa)
Alpha-2-macroglobulin domain-containing protein {ECO:0000313|EMBL:KKU76455.1}; TaxID=1618655 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWB1_47_6b.
alpha-2-macroglobulin domain-containing protein; K06894 id=5093957 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
alpha-2-macroglobulin domain-containing protein
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_14
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

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comp(17163..19268)
-----------------
DNA (2106bp)
protein (702aa)
pbpB; penicillin-binding protein 2; K05367 penicillin-binding protein 1C [EC:2.4.1.-] id=5095212 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Penicillin-binding protein, 1A family, nonfunctional {ECO:0000313|EMBL:KKU86045.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
pbpB; penicillin-binding protein 2
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_15
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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19381..19935
-----------------
DNA (555bp)
protein (185aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_16
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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comp(20154..20252)
-----------------
DNA (99bp)
protein (33aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_17
GWA2_OD1_47_10b, Parcubacteria, Bacteria

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comp(20261..20431)
-----------------
DNA (171bp)
protein (57aa)
hypothetical protein Tax=GWA2_OD1_47_10b
RIFCSPLOWO2_01_FULL_OD1_47_79_rifcsplowo2_01_scaffold_18979_18
Parcubacteria bacterium GW2011_GWA1_47_9, Parcubacteria, Bacteria

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20598..23405
-----------------
DNA (2808bp)
protein (936aa)
Chitinase {ECO:0000313|EMBL:KKU86041.1}; TaxID=1618794 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_47_9.;"
hypothetical protein id=5803305 bin=OD1_GWC2_34_28 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Displaying 18 items

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