ggKbase home page

RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_16693_4

Organism: Nitrospinae bacterium RIFCSPLOWO2_02_FULL_39_110

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38
Location: 4521..5777

Top 3 Functional Annotations

Value Algorithm Source
secretion protein HlyD; K02005 HlyD family secretion protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 418.0
  • Bit_score: 797
  • Evalue 1.20e-227
Efflux transporter protein id=3730999 bin=GWF2_Nitrospirae_44_13 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae similarity UNIREF
DB: UNIREF100
  • Identity: 33.3
  • Coverage: 381.0
  • Bit_score: 199
  • Evalue 6.00e-48
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 29.7
  • Coverage: 414.0
  • Bit_score: 177
  • Evalue 6.90e-42

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Nitrospinae_39_15 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 1257
ATGCAAAAAAGGAAAAAGACAGTTTCGCAGAGAATCCTGAAAATCCTGCTCATCATCTTCATCCTTTCTGCCGCCGGAGTGGGAGGATACCTTTATTATCGGAAAACCACTGTCATACCGGTTCAGACAAAGAAGGTCACCCGCAGGCTGTTTCTATATACTGTTACATCCACATCTTCCGGAACTATAAAGGCGGACAGGGCTGCAAAAATATCGTCGCGGATAAACGGGCGGGTCATCAGGGTCGGCTTCAACGAAGGGGACATAGTTAAGGCAGGAAAGGAGCTTATTGCCCTTGAGACGGAGGAGGCATCTGCAAATATAAAAATGGTTGAGGCGAACCTCTCGCTGGCAAAGGTCAGGTATGAACAGGCAAAGGCGGCATTTGAGGTGGAAAAAAAGCTTGTCAATTTAAGGATTCAGGAAACTGAAGCCAATCGGAAGGAGGCATCGGCTGCACTCCGGAGGGCACAGGATATGATGCGCCAGGGGATAATATCAGACCAGCAGATGGACACAACACTCAGAAATTATGATGTTGCACATGCGGTATACGAGTCTGCTCTTGCCAGCAAGGAAGGAGTCGTGCTCAAGGAAAAGGAGATGCTTGCTGCAAAGACAGAGGTGGAGCATCTGGAGGAGTCGCTCAGAATCGCCGTAATTCAGAAGGGCTACCTGATAATCGCAGCTCCTTTTAACGGAATCGTCTCCTTTAAACAGGTTGAGGTGGGGGAGATGGTTCTCCCCGGTGTAGCGCTGGCAGAGATAGTTGATAACAACTCCATGTATGTCCATGCGCCTGTTGATGAGGCTGATATACATAAAATACATGAGGGGCAGGAGGTGAAGATTACCATAGATGCCTTCCCGGGCACAGAATTTATCGGAAAGATATATGAGATATCCCCGATTGTCTCTGAAGAGAAATTGGAGGGGAGGACTGTAACTATAAAGGTCTCCATAGACCAGCATAAGGAAAAGCTCAGACCGGGAATGTCATGCGATGTGGAGATTCTGATTGACAAGATACCTGATGCACCGCTCGTTCCTACAAACCTGCTTATGGGGAGGGGGGAGAAGAGGTATGTATTCGTTGTTGAAAACGGCAGTGTTAAAAAAAGATACCTTCGCCTCGGTCTTTCCAACTGGGATTTTACCGTAGTAGAGGATGGACTGCGGGAGGGGGAAGAGATAATCTCCTCAATAGATATCCTTAATCTGAAGGATGGAAGCCGTGTCGTAGTAAAGAATGAATAG
PROTEIN sequence
Length: 419
MQKRKKTVSQRILKILLIIFILSAAGVGGYLYYRKTTVIPVQTKKVTRRLFLYTVTSTSSGTIKADRAAKISSRINGRVIRVGFNEGDIVKAGKELIALETEEASANIKMVEANLSLAKVRYEQAKAAFEVEKKLVNLRIQETEANRKEASAALRRAQDMMRQGIISDQQMDTTLRNYDVAHAVYESALASKEGVVLKEKEMLAAKTEVEHLEESLRIAVIQKGYLIIAAPFNGIVSFKQVEVGEMVLPGVALAEIVDNNSMYVHAPVDEADIHKIHEGQEVKITIDAFPGTEFIGKIYEISPIVSEEKLEGRTVTIKVSIDQHKEKLRPGMSCDVEILIDKIPDAPLVPTNLLMGRGEKRYVFVVENGSVKKRYLRLGLSNWDFTVVEDGLREGEEIISSIDILNLKDGSRVVVKNE*