ggKbase home page

RIFCSPLOWO2_02_FULL_CP_39_110_rifcsplowo2_02_scaffold_16693_6

Organism: Nitrospinae bacterium RIFCSPLOWO2_02_FULL_39_110

near complete RP 48 / 55 MC: 1 BSCG 48 / 51 ASCG 12 / 38
Location: 6677..7876

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter; K02004 putative ABC transport system permease protein Tax=RifCSPlowO2_12_Nitrospinae_39_15_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 399.0
  • Bit_score: 762
  • Evalue 3.10e-217
Efflux ABC transporter, permease protein id=4002143 bin=GWC2_Nitrospirae_57_13 species=Megasphaera micronuciformis genus=Megasphaera taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8 similarity UNIREF
DB: UNIREF100
  • Identity: 59.1
  • Coverage: 401.0
  • Bit_score: 467
  • Evalue 1.10e-128
ABC transporter similarity KEGG
DB: KEGG
  • Identity: 41.0
  • Coverage: 405.0
  • Bit_score: 317
  • Evalue 5.30e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Nitrospinae_39_15 → Nitrospinae → Bacteria

Sequences

DNA sequence
Length: 1200
ATGCTTGACATTATTTTCATGGCTCTTGAGAGTATTATGCTCAACAAGGTCCGCTCTTTCCTCACCATGCTGGGGGTGATGATAGGGGTGGCGTCGGTCATCCTTCTCGTCTCCCTTGGTGAGGGGACGAGAGAATATGTGTCCAGGGAATTGATGGGAATCGGAACAAACCTGCTGGTCATAACTCCCGGGAAGACAGAGACAACAGGTCATGCCCCGCCGCAGAGTTCCACATCGAGAAAATTGACTTATGACGATACGATGCATCTGAAAAGGAACGCCTTCACTCTAAAAGATGTTGCACCAATTGTTATAGGCACTGCAAAGGTCAAGTACGGAAACCGCAGCCGTAATGTCCTTACCCTCGGCATCACAAATTCCTTCCAGGATGTGCGGAACCTGCATGTAGAAATCGGCTCATTTGTATCGGATGAGGATGTAGAATTTCACCGGAAGGTGGCGGTGATAGGAAGGACGGTCAAGAAGGAGCTCTTTGAAGATGAAAACCCTCTTGGAAAGATGGTCTGGCTTTCCGGCGTAAAATACCGGATCGTCGGTATCATGGAGAAAAAGGGGGTCTCCTTCGGCTTTGACATTGATGACCTTGTCTTTATTCCCCTGAAATCGGCACAGGACCTCTTTGATACGGACAGAATGACGGAGATATTGGCAGAGGCTATAAATGCCGAGACTGTGGAGACGGCAAAGGAGGAGATAATACAGATTCTTAAGAAGCGCCATGATAATAAGGAGGACTTTTCCGTGGTTACACAGGCGAGCCTTCTATCTGCGCTTAATACAATCCTTAAGGTGCTAACCTATGTTATAGGTGCTATAGCAGGGATATCTCTCGTTGTAGGCGGAATCGGGATAATGAATATCATGCTCGTCTCGGTTCAGGAGCGGACTAAAGAGATAGGAATCAGAAAGGCAATCGGAGCCCAGAACAGCGATATATTGAAGCAGTTTCTCTTTGAATCCACCATCATCAGCTCCTTTGGCGGGATTATCGGCATCATGAGCGGGGCGGGAATTGCTTATGCTATCCCGGTTTTTTTTCCGGTTGTCCCGGTCAAGGTATCTCTGTGGTCTGTAATTCTTGCATTCTCATTCTCGGCAGCGGTAGGGATATTTTTCGGCGCATTTCCCGCACAGAAAGCGGCGAAATTGGACCCGGTTGAGGCACTGAGGTATGAGTAA
PROTEIN sequence
Length: 400
MLDIIFMALESIMLNKVRSFLTMLGVMIGVASVILLVSLGEGTREYVSRELMGIGTNLLVITPGKTETTGHAPPQSSTSRKLTYDDTMHLKRNAFTLKDVAPIVIGTAKVKYGNRSRNVLTLGITNSFQDVRNLHVEIGSFVSDEDVEFHRKVAVIGRTVKKELFEDENPLGKMVWLSGVKYRIVGIMEKKGVSFGFDIDDLVFIPLKSAQDLFDTDRMTEILAEAINAETVETAKEEIIQILKKRHDNKEDFSVVTQASLLSALNTILKVLTYVIGAIAGISLVVGGIGIMNIMLVSVQERTKEIGIRKAIGAQNSDILKQFLFESTIISSFGGIIGIMSGAGIAYAIPVFFPVVPVKVSLWSVILAFSFSAAVGIFFGAFPAQKAAKLDPVEALRYE*