ggKbase home page

RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_40

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(42955..44862)

Top 3 Functional Annotations

Value Algorithm Source
ATP-binding protein n=2 Tax=Pseudomonas RepID=U1TV02_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 96.4
  • Coverage: 635.0
  • Bit_score: 1186
  • Evalue 0.0
msbA; lipid A export permease/ATP-binding protein MsbA Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 635.0
  • Bit_score: 1227
  • Evalue 0.0
ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 96.4
  • Coverage: 635.0
  • Bit_score: 1186
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1908
ATGTCGCCGGTAGGATCCAACCGGGCCGCGGCTTACGCCGGGTGCAAGTACAACAGAGAAGCTGTGCTAAAGTCAGCCTCCTTTTTCAAAACGCCGCGTGATATGACCGACTCCAGTCCGAGCGCAAGCCCTTCGAGCTTGAAAATATACTTCCGCCTGCTCAGTTACGTTAAGCCCTATATGGGCTTGTTCGCGTTGAGTATCCTTGGATTTCTGATTTTCGCGTCGACCCAACCGATGCTGGGTTACATCCTCAAGTACTTTGTCGACGGTCTTTCCAATCCGGAAGCTGTGCTGTTCCCGACCGTGCCCTTTTTGCGCGACCTGCAATTGCTGCAGGCGGTGCCGCTGCTGATTATCCTGATCGCGGCCTGGCAGGGCCTGGGTTCATTCCTGGGCAACTACCTGTTGGCCAAGGTCTCCCTGGGTTTGGTCCACGACCTGCGGGTGCAACTGTTCAACAACCTGCTGACGCTGCCCAACCGTTACTTCGATAACCACAACTCCGGGCACCTTATTTCCCGCATTACCTTCAACGTGACCATGGTCACGGGTGCCGCGACCGATGCCATCAAGGTGGTGATTCGCGAAGGCATGACGGTGATCTTCCTGTTCGCTTCCTTGCTGTACATGAACTGGCGCCTCACCTTGGTAATGATCGCGATCCTGCCGTTGATTGCCGTGATGGTCAGTACCGCCAGCAAGAAATTTCGCAAGCAGAGCAAGAAGATCCAGGTGGCCATGGGCGACGTGACCCACGTGGCCTCGGAGACCATCCAGGGCTACCGCGTGGTGCGCAGCTTCGGCGGCGAAGTCTACGAACAGAAGCGCTTTTTCAAGGCCAGCCAGAGCAACACCAACAAGCAACTGCGCATGACCCGCACCGGGGCGATCTACACCCCGGCGCTGCAATTGGTGATCTACTCCGCCATGGCCGTGCTGATGTTCCTGGTGCTGTACCTGCGTGGCGACGCCTCGGCGGGTGACATGGTGGCCTACATCACCCTGGCGGGCTTGCTGCCCAAGCCGATCCGCCAACTTTCGGAAGTCAGCTCGACCATCCAGAAAGGCGTGGCGGGCGCCGAAAGCATCTTCGAACAACTGGACGAAGACGTTGAGGTCGACCACGGCACTCTCGAACGCGACAAGGTCAGCGGTCGTCTGGAAGTGCGTCACCTGAACTTCACCTACCCTGGCACCGATCGCCATGTGCTCAAGGACATCAGCTTCACCGCCGAGCCTGGGCAGATGATTGCGCTGGTGGGGCGTTCGGGCAGTGGCAAGTCGACCCTGGCCAGCCTGATCCCGCGCTTCTACCACCATGAAAGCGGTGAAATTCTGCTCGATGGCATCGAGATCGAAGACTACAAGCTGCTCAACCTGCGCAAGCATATTGCCCAGGTCACCCAGCATGTGACCCTGTTCAGCGACACCGTGACCAACAACATTGCCTATGGCGACCTGGCCGGTGCGCCTCGCGCCGACGTCGAAGCGGCGGCGGCGGATGCCAATGCCAAGGACTTCATCGATCAGTTGCCCAAGGGCTTTGATACTCAGGTGGGTGAGAACGGTGTGCTGTTGTCCGGCGGCCAGCGCCAGCGTTTGGCGATTGCCCGTGCATTGCTTAAGAACGCGCCGTTGCTGATCCTCGACGAGGCCACCTCGGCACTGGACACCGAGTCCGAGCGGCACATCCAGGCGGCACTGGATAAGGTCATGCAAGGCCGCACGACCCTGGTGATTGCGCACCGTTTGTCCACCATCGAGAAGGCTGATCTGATCTTGGTGATGGACGACGGGCGGATTGTCGAACGTGGTACCCATGGCGAGTTGTTGGCGCAGAACGGCTATTACGCCCGCCTGCATGCCATGGGCCTGGATGCACCGGTGCAGGCTGATATCACCTGA
PROTEIN sequence
Length: 636
MSPVGSNRAAAYAGCKYNREAVLKSASFFKTPRDMTDSSPSASPSSLKIYFRLLSYVKPYMGLFALSILGFLIFASTQPMLGYILKYFVDGLSNPEAVLFPTVPFLRDLQLLQAVPLLIILIAAWQGLGSFLGNYLLAKVSLGLVHDLRVQLFNNLLTLPNRYFDNHNSGHLISRITFNVTMVTGAATDAIKVVIREGMTVIFLFASLLYMNWRLTLVMIAILPLIAVMVSTASKKFRKQSKKIQVAMGDVTHVASETIQGYRVVRSFGGEVYEQKRFFKASQSNTNKQLRMTRTGAIYTPALQLVIYSAMAVLMFLVLYLRGDASAGDMVAYITLAGLLPKPIRQLSEVSSTIQKGVAGAESIFEQLDEDVEVDHGTLERDKVSGRLEVRHLNFTYPGTDRHVLKDISFTAEPGQMIALVGRSGSGKSTLASLIPRFYHHESGEILLDGIEIEDYKLLNLRKHIAQVTQHVTLFSDTVTNNIAYGDLAGAPRADVEAAAADANAKDFIDQLPKGFDTQVGENGVLLSGGQRQRLAIARALLKNAPLLILDEATSALDTESERHIQAALDKVMQGRTTLVIAHRLSTIEKADLILVMDDGRIVERGTHGELLAQNGYYARLHAMGLDAPVQADIT*