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RIFCSPLOWO2_12_FULL_Pseudomonas_fluorescens_59_450_rifcsplowo2_12_scaffold_5515_54

Organism: Pseudomonadales bacterium RIFCSPLOWO2_12_FULL_59_450

near complete RP 41 / 55 MC: 5 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 2
Location: comp(59976..61100)

Top 3 Functional Annotations

Value Algorithm Source
Lipopolysaccharide core biosynthesis protein WaaG n=3 Tax=Pseudomonas RepID=I2BSK2_PSEFL similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 374.0
  • Bit_score: 752
  • Evalue 2.10e-214
waaG; lipopolysaccharide core biosynthesis protein WaaG similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 374.0
  • Bit_score: 752
  • Evalue 6.00e-215
  • rbh
waaG; lipopolysaccharide core biosynthesis protein WaaG Tax=RifCSPlowO2_12_Pseudomonas_60_38_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 374.0
  • Bit_score: 752
  • Evalue 3.00e-214

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Taxonomy

RLO_Pseudomonas_60_38 → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1125
ATGCAACTGGCTTTTGTTCTGTACAAGTACTTCCCTTTCGGTGGCCTGCAGCGCGACTTCATGCGCATCGCCCTGGAATGCCAGCAGCGCGGCCACAGCATTCGGGTGTACACCCTGATCTGGGAAGGTGATATCCCGCCAGGCTTTGAGGTGCTGGTGGCGCCGGTCAAGGCCTTGGTCAACCACCGTCGCAACGAAAAGCTCTACGCCTGGATCCAGGCCGACCTGGCCAAGCGCCCAGTGGACCGCGTGGTGGGCTTCAACAAGATGCCGGGGCTGGATCTGTACTTTGCCGCCGACGGTGTGTTCGAGGACAAGGCCCAGACCCTGCGCAACCCGATGTATCGCTGGTTCGGGCGCTACAAGCACTTTGCCGAATACGAGCGCGCCGTGTTCGATAAAAACGCCAAGACGCAGATCATGGTGTTGTCTGAGCATCAGCAGCAGCTGTTTACCCAGTATTACGGCACCCAGGCCGAGCGTTTTCACCTGTTGCCACCGGGTATTGCCCGCGACCGCCGCGCCCCGCCGAACGCCGCCGAAATCCGCGCCGAGTTCCGCGCTGAATTTGGCTTGGCCGAGGATGATCTGCTGTTGGTGCAGATCGGTTCGGGGTTCAAGACCAAGGGCGTCGACCGCAGCCTCAAGGCGCTGGCCGCTCTGCCTTCGCGGCTGAAGAAACGCACCCGGCTATTTGTAATCGGCCAGGACGACCCCAAAGTATTCCAATTGCAGAGCGCGGCGCTGGGCCTGGGCGACCAGGTGCAGTTCTTCAAGGGCCGCAATGATATTCCGCGTTTCCTGCTGGGGGCGGACCTGTTGATTCACCCTGCGTACAACGAGGCGGCCGGCATGGTGCTGGTCGAAGCGGTGGTCGCCGGCCTCCCTGTACTGGTGAGCCAGGTGTGCGGCTATGCGTTCTACATCGACAAGGCCCAGAGCGGCCGGGTGTTGGACGAGCCGTTCGAGCAAACCCAGCTCAACCAGTATTTGGTCGATATGCTCGACGACCCACAAGCGCGTGCGACCTGGAGTCGCAATGGTCTGGCCTTCGCCGAGACGGCCGACCTCTTTAGCATGCCGCAGTACGCTGCGGACCTGATTCTGGCGGAGCCAAACCGATGA
PROTEIN sequence
Length: 375
MQLAFVLYKYFPFGGLQRDFMRIALECQQRGHSIRVYTLIWEGDIPPGFEVLVAPVKALVNHRRNEKLYAWIQADLAKRPVDRVVGFNKMPGLDLYFAADGVFEDKAQTLRNPMYRWFGRYKHFAEYERAVFDKNAKTQIMVLSEHQQQLFTQYYGTQAERFHLLPPGIARDRRAPPNAAEIRAEFRAEFGLAEDDLLLVQIGSGFKTKGVDRSLKALAALPSRLKKRTRLFVIGQDDPKVFQLQSAALGLGDQVQFFKGRNDIPRFLLGADLLIHPAYNEAAGMVLVEAVVAGLPVLVSQVCGYAFYIDKAQSGRVLDEPFEQTQLNQYLVDMLDDPQARATWSRNGLAFAETADLFSMPQYAADLILAEPNR*