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scnpilot_p_inoc_scaffold_58_246

Organism: SCNpilot_P_inoc_Xanthomonadales_65_14

near complete RP 52 / 55 BSCG 50 / 51 ASCG 11 / 38
Location: comp(285069..285704)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma70 factor n=1 Tax=Dyella japonica RepID=UPI0002EAD3E6 similarity UNIREF
DB: UNIREF100
  • Identity: 58.4
  • Coverage: 209.0
  • Bit_score: 239
  • Evalue 3.40e-60
RNA polymerase sigma70 factor {ECO:0000313|EMBL:KJV30974.1}; TaxID=345309 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Luteibacter.;" source="Luteibacter similarity UNIPROT
DB: UniProtKB
  • Identity: 62.6
  • Coverage: 195.0
  • Bit_score: 241
  • Evalue 1.30e-60
sigma-70 family RNA polymerase sigma factor similarity KEGG
DB: KEGG
  • Identity: 60.3
  • Coverage: 204.0
  • Bit_score: 238
  • Evalue 1.70e-60

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Taxonomy

Luteibacter yeojuensis → Luteibacter → Xanthomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 636
ATGCGCGAGACCACGGATGCCGAAACGATTCCCACGCACGGAACCGCGATGAACGCCGCCGTGGCACTCGAACTGGCGTCGCCGGTGCTGGATGCCGCGCGACCGGTCGCGGCCACCATCGAGGCCTTCCTCGCCTCGGTCGAACGGCGCGCTTGGCGCGTCGCGGAAATCGCGCTGCGCGATCCGGACGAGGCGCTGGACGCAGTGCAGGACGCGATGCTGCGGCTGGTGAAACATTATTCCGGCAAGCCGGCCGAGGAATGGCCGCCCTTGTTCTGGGGCATCCTGCGCCGGCGCATCACGGACCTGCAACGCCGGCGCACGGTCCGCAACCGGATCATGGTCTGGACGGGCCGCATGGTCACGGACGATGACGAGGAACTGCCGGCGTGGGAAGCGCCGGACCTCGGTCCCGAGCCGTCGCGCGCGCTGGCCTCGCGACAGGCGTTGGCTGCGATGTCTGCGGCCATCCGCGCACTTCCGCGGCGTCAACAGCAGGCGTTCCTGTTGCGGGTGCTGGAAGGCCTGGACGTGGCCGACACGGCCAAGGCCATGGGTTGCTCGGAAGGCAGTGTCAAAACGCACTTGTCGCGCGCCATGGATGCGCTGCGGACACGCTTGGAGGATTGGCGATGA
PROTEIN sequence
Length: 212
MRETTDAETIPTHGTAMNAAVALELASPVLDAARPVAATIEAFLASVERRAWRVAEIALRDPDEALDAVQDAMLRLVKHYSGKPAEEWPPLFWGILRRRITDLQRRRTVRNRIMVWTGRMVTDDDEELPAWEAPDLGPEPSRALASRQALAAMSAAIRALPRRQQQAFLLRVLEGLDVADTAKAMGCSEGSVKTHLSRAMDALRTRLEDWR*